SMTL ID : 6c2y.1

Human GRK2 in complex with Gbetagamma subunits and CCG257142

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x EJS: (4R,5R,6S)-4-[4-fluoro-3-({[3-(methoxymethyl)-1,2,4-oxadiazol-5-yl]methyl}carbamoyl)phenyl]-N-(2H-indazol-5-yl)-6-methyl-2-oxohexahydropyrimidine-5-carboxamide(Non-covalent)

EJS.1: 22 residues within 4Å: Chain A: I.197, G.198, R.199, G.200, G.201, F.202, G.203, V.205, A.218, K.220, L.222, A.236, E.239, V.255, L.271, D.272, M.274, A.321, N.322, L.324, S.334, D.335 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.205, A:V.205, A:V.255, A:L.271, A:L.324, A:L.324, A:L.324 Hydrogen bonds: A:R.199, A:G.201, A:F.202, A:M.274, A:N.322, A:S.334, A:D.335 Water bridges: A:R.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waldschmidt, H.V. et al., Utilizing a structure-based docking approach to develop potent G protein-coupled receptor kinase (GRK) 2 and 5 inhibitors. Bioorg. Med. Chem. Lett. (2018)

Release Date

2018-04-25

Peptides

Beta-adrenergic receptor kinase 1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

Beta-adrenergic receptor kinase 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

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