SMTL ID : 8uwl.1

5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x H8G: N,N-diethyl-N'-[(8alpha)-6-methyl-9,10-didehydroergolin-8-yl]urea(Non-covalent)

H8G.1: 7 residues within 4Å: Chain A: W.86, D.90, V.91, S.94, T.95, C.162, S.177 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.90 Hydrogen bonds: A:D.90, A:D.90, A:S.177, A:S.177 Salt bridges: A:D.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyu, J. et al., AlphaFold2 structures guide prospective ligand discovery. Science (2024)

Release Date

2024-05-29

Peptides

5-hydroxytryptamine receptor 2A: A
G protein subunit q (Gi2-mini-Gq chimera): B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
Single-chain variable fragment 16 (scFv16): E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
Show / Hide

5-hydroxytryptamine receptor 2A

G protein subunit q (Gi2-mini-Gq chimera)

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Single-chain variable fragment 16 (scFv16)

Related Entries With Identical Sequence