SMTL ID : 6hmp.2 (1 other biounit)

Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azoimidazole-based Inhibitor (compound 3)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

1 x GEW: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide(Non-covalent)

GEW.1: 26 residues within 4Å: Chain A: R.33, I.35, S.37, G.38, S.39, I.43, A.56, I.57, K.58, Y.76, I.88, M.100, M.102, E.103, L.104, L.105, G.106, P.107, D.111, K.150, D.152, N.153, L.155, L.158, I.168, D.169 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.43, A:A.56, A:K.58, A:K.58, A:P.107, A:D.152, A:L.155 Hydrogen bonds: A:L.105, A:L.105 Halogen bonds: A:M.100

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: S.287, R.290, R.294 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.287 Salt bridges: A:R.290, A:R.294

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schehr, M. et al., 2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach. Photochem. Photobiol. Sci. (2019)

Release Date

2019-09-11

Peptides

Casein kinase I isoform delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Casein kinase I isoform delta

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