SMTL ID : 6oya.1

Structure of the Rhodopsin-Transducin-Nanobody Complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x RET: RETINAL(Covalent)

RET.1: 9 residues within 4Å: Chain E: M.86, A.117, E.122, Y.191, M.207, H.211, W.265, Y.268, K.296 8 PLIP interactions: 8 interactions with chain E Hydrophobic interactions: E:A.117, E:Y.191, E:H.211, E:W.265, E:Y.268, E:Y.268, E:Y.268, E:K.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gao, Y. et al., Structures of the Rhodopsin-Transducin Complex: Insights into G-Protein Activation. Mol.Cell (2019)

Release Date

2019-07-24

Peptides

Gt-alpha/Gi1-alpha chimera: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(T) subunit gamma-T1: C
Camelid antibody VHH fragment: D
Rhodopsin: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
R

Membrane

We predict this structure to be a membrane protein.
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Gt-alpha/Gi1-alpha chimera

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(T) subunit gamma-T1

Camelid antibody VHH fragment

Rhodopsin

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