SMTL ID : 6tnt.1

SUMOylated apoAPC/C with repositioned APC2 WHB domain

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-2-1-1-2-2-1-2-1-1-1-1-1-2-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain B: C.23, I.25, F.55, H.56, C.59, I.60 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.23 ZN.2: 4 residues within 4Å: Chain B: C.51, C.73, C.76, Q.78 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.51, B:C.73, B:C.76 ZN.3: 1 residues within 4Å: Chain B: H.58 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.58, B:H.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yatskevich, S. et al., Molecular mechanisms of APC/C release from spindle assembly checkpoint inhibition by APC/C SUMOylation. Cell Rep (2021)

Release Date

2021-01-13

Peptides

Anaphase-promoting complex subunit 1: A
Anaphase-promoting complex subunit 11: B
Cell division cycle protein 23 homolog: CP
Anaphase-promoting complex subunit 15: D
Anaphase-promoting complex subunit 16: E
Cell division cycle protein 27 homolog: FH
Anaphase-promoting complex subunit CDC26: GR
Anaphase-promoting complex subunit 4: I
Cell division cycle protein 16 homolog: JK
Anaphase-promoting complex subunit 10: L
Anaphase-promoting complex subunit 13: M
Anaphase-promoting complex subunit 2: N
Anaphase-promoting complex subunit 5: O
UNIDENTIFIED PEPTIDE: Q
Anaphase-promoting complex subunit 7: ST

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

P
P

D
D

E
E

F
F

H
H

G
G

R
W

I
I

J
J

K
K

L
L

M
M

N
N

O
O

Q
T

S
X

T
Y

Anaphase-promoting complex subunit 1

Anaphase-promoting complex subunit 11

Cell division cycle protein 23 homolog

Anaphase-promoting complex subunit 15

Anaphase-promoting complex subunit 16

Cell division cycle protein 27 homolog

Anaphase-promoting complex subunit CDC26

Anaphase-promoting complex subunit 4

Cell division cycle protein 16 homolog

Anaphase-promoting complex subunit 10

Anaphase-promoting complex subunit 13

Anaphase-promoting complex subunit 2

Anaphase-promoting complex subunit 5

UNIDENTIFIED PEPTIDE

Anaphase-promoting complex subunit 7

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