SMTL ID : 8pkp.1

Cryo-EM structure of the apo Anaphase-promoting complex/cyclosome (APC/C) at 3.2 Angstrom resolution

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-2-1-2-2-1-1-1-2-2-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain R: C.221, C.224, C.231, C.233 4 PLIP interactions: 4 interactions with chain R Metal complexes: R:C.221, R:C.224, R:C.231, R:C.233 ZN.2: 4 residues within 4Å: Chain S: C.23, C.26, H.56, C.59 4 PLIP interactions: 4 interactions with chain S Metal complexes: S:C.23, S:C.26, S:H.56, S:C.59 ZN.3: 4 residues within 4Å: Chain S: C.34, C.37, C.44, H.58 4 PLIP interactions: 4 interactions with chain S Metal complexes: S:C.34, S:C.37, S:C.44, S:H.58 ZN.4: 5 residues within 4Å: Chain S: C.51, H.53, C.73, M.75, C.76 4 PLIP interactions: 4 interactions with chain S Metal complexes: S:C.51, S:H.53, S:C.73, S:C.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoefler, A. et al., High-resolution structure of the Anaphase-promoting complex (APC/C) bound to co-activator Cdh1. To Be Published

Release Date

2023-07-19

Peptides

Anaphase-promoting complex subunit 1: A
Anaphase-promoting complex subunit 15: B
Anaphase-promoting complex subunit CDC26: CN
Anaphase-promoting complex subunit 16: D
Cell division cycle protein 27 homolog: EJ
Cell division cycle protein 16 homolog: FK
Anaphase-promoting complex subunit 10: G
Anaphase-promoting complex subunit 13: H
Anaphase-promoting complex subunit 5: I
Cell division cycle protein 23 homolog: LM
Anaphase-promoting complex subunit 7: OP
Anaphase-promoting complex subunit 4: Q
Anaphase-promoting complex subunit 2: R
Anaphase-promoting complex subunit 11: S

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
G

N
W

D
H

E
J

J
P

F
K

K
Q

G
L

H
M

I
O

L
U

M
V

O
Y

P
Z

Q
I

R
N

S
C

Anaphase-promoting complex subunit 1

Anaphase-promoting complex subunit 15

Anaphase-promoting complex subunit CDC26

Anaphase-promoting complex subunit 16

Cell division cycle protein 27 homolog

Cell division cycle protein 16 homolog

Anaphase-promoting complex subunit 10

Anaphase-promoting complex subunit 13

Anaphase-promoting complex subunit 5

Cell division cycle protein 23 homolog

Anaphase-promoting complex subunit 7

Anaphase-promoting complex subunit 4

Anaphase-promoting complex subunit 2

Anaphase-promoting complex subunit 11

Related Entries With Identical Sequence