SMTL ID : 6uzf.1

Crystal structure of the unliganded bromodomain of human BRD9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: H.20, R.23, Q.24, R.27 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.23, A:R.27, A:R.27 Salt bridges: A:H.20, A:R.23, A:R.27

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: M.54, T.58, K.62 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.62 EDO.3: 2 residues within 4Å: Chain A: D.83, T.87 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.83, A:T.87

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 4 residues within 4Å: Chain A: F.33, F.34, N.89, Y.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains. J.Med.Chem. (2020)

Release Date

2020-03-11

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 9

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