SMTL ID : 6v0x.1

Crystal structure of the bromodomain of human BRD9 bound to sunitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x B49: N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide(Non-covalent)

B49.1: 11 residues within 4Å: Chain A: F.33, F.34, V.38, I.42, Y.46, N.84, A.85, Y.88, N.89, R.90, Y.95 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.34, A:V.38, A:A.85, A:Y.95 Hydrogen bonds: A:F.33 pi-Stacking: A:Y.95 Halogen bonds: A:N.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains. J.Med.Chem. (2020)

Release Date

2020-03-11

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 9

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