SMTL ID : 6vzl.2 (1 other biounit)

Crystal structure of human PPARgamma ligand binding domain in complex with GW1929

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x EDK: (2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid(Non-covalent)

EDK.1: 13 residues within 4Å: Chain A: R.78, G.82, C.83, F.85, R.86, S.87, I.124, L.128, L.131, I.139, S.140, E.141, M.162 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:R.86, A:R.86, A:I.124, A:L.128, A:L.131, A:I.139, A:I.139 Hydrogen bonds: A:R.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shang, J. et al., Structural mechanism underlying ligand binding and activation of PPAR gamma. Structure (2021)

Release Date

2021-03-03

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peroxisome proliferator-activated receptor gamma

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