SMTL ID : 6wj2.1

CryoEM structure of the SLC38A9-RagA-RagC-Ragulator complex in the pre-GAP state

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-mer
Ligands
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
1 x L8S: 9-{5-O-[(S)-hydroxy{[(R)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]-alpha-L-arabinofuranosyl}-3,9-dihydro-1H-purine-2,6-dione(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Fromm, S.A. et al., Structural mechanism for amino acid-dependent Rag GTPase nucleotide state switching by SLC38A9. Nat.Struct.Mol.Biol. (2020)
Release Date
2020-09-02
Peptides
Ragulator complex protein LAMTOR1: A
Ragulator complex protein LAMTOR2: B
Ragulator complex protein LAMTOR3: C
Ragulator complex protein LAMTOR4: D
Ragulator complex protein LAMTOR5: E
Ras-related GTP-binding protein A: F
Ras-related GTP-binding protein C: G
Sodium-coupled neutral amino acid transporter 9: H
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H

Ragulator complex protein LAMTOR1

Ragulator complex protein LAMTOR2

Ragulator complex protein LAMTOR3

Ragulator complex protein LAMTOR4

Ragulator complex protein LAMTOR5

Ras-related GTP-binding protein A

Ras-related GTP-binding protein C

Sodium-coupled neutral amino acid transporter 9

Related Entries With Identical Sequence

5x6u.1 | 5x6v.1 | 5y39.1 | 5y39.2 | 5y3a.1 | 5y3a.2 | 5yk3.1 | 5yk3.3 | 6b9x.1 | 6ehp.1 | 6ehr.1 | 6nzd.1 | 6ulg.1 | 6wj3.1 | 7t3a.1 | 7t3b.1 | 7t3c.1 | 7ux2.1 | 7uxc.1 | 7uxh.1 | 8dhb.1