SMTL ID : 6yta.1

CLK1 bound with imidazopyridazine (Cpd 1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: T.71, S.136, N.137 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.137 Water bridges: A:S.136, A:N.137

1 x IYZ: 1-(3-{6-[(CYCLOPROPYLMETHYL)AMINO]IMIDAZO[1,2-B]PYRIDAZIN-3-YL}PHENYL)ETHANONE(Non-covalent)

IYZ.2: 15 residues within 4Å: Chain A: L.22, F.27, V.30, A.44, K.46, F.96, E.97, L.98, L.99, G.100, S.102, E.147, L.150, V.179, D.180 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.22, A:L.22, A:F.27, A:V.30, A:F.96, A:F.96, A:L.150, A:V.179, A:V.179 Hydrogen bonds: A:L.22, A:L.99 Water bridges: A:S.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schroder, M. et al., DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity. J.Med.Chem. (2020)

Release Date

2020-07-15

Peptides

Dual specificity protein kinase CLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity protein kinase CLK1

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