SMTL ID : 7a6k.3 (3 other biounits)

Crystal Structure of EGFR-T790M/V948R in Complex with TAK-788

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x R28: propan-2-yl 2-[[4-[2-(dimethylamino)ethyl-methyl-amino]-2-methoxy-5-(propanoylamino)phenyl]amino]-4-(1-methylindol-3-yl)pyrimidine-5-carboxylate(Covalent)

R28.1: 17 residues within 4Å: Chain A: L.29, G.30, V.37, A.54, K.56, L.99, M.101, Q.102, L.103, M.104, P.105, G.107, C.108, D.111, R.152, L.155, T.165 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.29, A:L.29, A:V.37, A:V.37, A:K.56, A:L.155 Hydrogen bonds: A:M.104, A:M.104, A:C.108 Salt bridges: A:D.111

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.87, L.89, Q.102 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.102 Salt bridges: A:R.87 SO4.3: 4 residues within 4Å: Chain A: P.83, K.157, H.161, K.163 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:K.157, A:H.161, A:K.163 SO4.4: 3 residues within 4Å: Chain A: K.157, T.158, H.161 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.158 Salt bridges: A:K.157, A:H.161 SO4.5: 3 residues within 4Å: Chain A: L.110, R.114, K.224 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.114 Salt bridges: A:R.114, A:K.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lategahn, J. et al., Insight into Targeting Exon20 Insertion Mutations of the Epidermal Growth Factor Receptor with Wild Type-Sparing Inhibitors. J.Med.Chem. (2022)

Release Date

2022-02-23

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Epidermal growth factor receptor

Related Entries With Identical Sequence