SMTL ID : 7zyq.1 (1 other biounit)

Crystal Structure of EGFR-T790M/V948R in Complex with Reversible Aminopyrimidine 13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x V58: phenyl 2-[[4-[4-(dimethylamino)piperidin-1-yl]-2-methoxy-phenyl]amino]-4-(1H-indol-3-yl)pyrimidine-5-carboxylate(Non-covalent)

V58.1: 15 residues within 4Å: Chain A: L.29, G.30, V.37, A.54, K.56, L.99, M.101, Q.102, L.103, M.104, P.105, G.107, L.155, T.165, D.166 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.29, A:V.37, A:V.37, A:V.37, A:A.54, A:K.56, A:L.99 Hydrogen bonds: A:M.104, A:M.104, A:D.166

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.87, L.89, Q.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.102 Water bridges: A:Q.102 Salt bridges: A:R.87 SO4.3: 4 residues within 4Å: Chain A: P.83, K.157, H.161, K.163 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:K.157, A:H.161, A:K.163

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 2 residues within 4Å: Chain A: R.114, K.224 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: Y.112, N.119, Y.124 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grabe, T. et al., Addressing the Osimertinib Resistance Mutation EGFR-L858R/C797S with Reversible Aminopyrimidines. Acs Med.Chem.Lett. (2023)

Release Date

2023-05-03

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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