SMTL ID : 7ddv.1

Crystal structure of M.tuberculosis imidazole glycerol phosphate dehydratase in complex with an inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-24-mer

Ligands

48 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.79, E.83, H.158 Chain P: H.183 Ligands: H3L.93 5 PLIP interactions: 1 interactions with chain P, 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: P:H.183, A:H.79, A:E.83, A:H.158, H2O.1 MN.2: 5 residues within 4Å: Chain A: H.53, H.182, E.186 Chain O: H.80 Ligands: H3L.3 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain O Metal complexes: A:H.53, A:H.182, A:E.186, O:H.80 MN.7: 5 residues within 4Å: Chain B: H.79, E.83, H.158 Chain O: H.183 Ligands: H3L.87 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain O, 1 Ligand-Water interactions Metal complexes: B:H.79, B:E.83, B:H.158, O:H.183, H2O.6 MN.8: 5 residues within 4Å: Chain B: H.53, H.182, E.186 Chain P: H.80 Ligands: H3L.9 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain P Metal complexes: B:H.53, B:H.182, B:E.186, P:H.80 MN.13: 5 residues within 4Å: Chain C: H.79, E.83, H.158 Chain M: H.183 Ligands: H3L.75 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain M, 1 Ligand-Water interactions Metal complexes: C:H.79, C:E.83, C:H.158, M:H.183, H2O.11 MN.14: 5 residues within 4Å: Chain C: H.53, H.182, E.186 Chain N: H.80 Ligands: H3L.15 4 PLIP interactions: 1 interactions with chain N, 3 interactions with chain C Metal complexes: N:H.80, C:H.53, C:H.182, C:E.186 MN.19: 5 residues within 4Å: Chain D: H.79, E.83, H.158 Chain N: H.183 Ligands: H3L.81 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain N, 1 Ligand-Water interactions Metal complexes: D:H.79, D:E.83, D:H.158, N:H.183, H2O.15 MN.20: 5 residues within 4Å: Chain D: H.53, H.182, E.186 Chain M: H.80 Ligands: H3L.21 4 PLIP interactions: 1 interactions with chain M, 3 interactions with chain D Metal complexes: M:H.80, D:H.53, D:H.182, D:E.186 MN.25: 5 residues within 4Å: Chain E: H.79, E.83, H.158 Chain V: H.183 Ligands: H3L.129 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: E:H.79, E:E.83, E:H.158, V:H.183, H2O.20 MN.26: 5 residues within 4Å: Chain E: H.53, H.182, E.186 Chain U: H.80 Ligands: H3L.27 4 PLIP interactions: 3 interactions with chain E, 1 interactions with chain U Metal complexes: E:H.53, E:H.182, E:E.186, U:H.80 MN.31: 5 residues within 4Å: Chain F: H.79, E.83, H.158 Chain U: H.183 Ligands: H3L.123 5 PLIP interactions: 3 interactions with chain F, 1 interactions with chain U, 1 Ligand-Water interactions Metal complexes: F:H.79, F:E.83, F:H.158, U:H.183, H2O.25 MN.32: 5 residues within 4Å: Chain F: H.53, H.182, E.186 Chain V: H.80 Ligands: H3L.33 4 PLIP interactions: 3 interactions with chain F, 1 interactions with chain V Metal complexes: F:H.53, F:H.182, F:E.186, V:H.80 MN.37: 5 residues within 4Å: Chain G: H.79, E.83, H.158 Chain W: H.183 Ligands: H3L.135 5 PLIP interactions: 3 interactions with chain G, 1 interactions with chain W, 1 Ligand-Water interactions Metal complexes: G:H.79, G:E.83, G:H.158, W:H.183, H2O.30 MN.38: 5 residues within 4Å: Chain G: H.53, H.182, E.186 Chain X: H.80 Ligands: H3L.39 4 PLIP interactions: 1 interactions with chain X, 3 interactions with chain G Metal complexes: X:H.80, G:H.53, G:H.182, G:E.186 MN.43: 5 residues within 4Å: Chain H: H.79, E.83, H.158 Chain X: H.183 Ligands: H3L.141 5 PLIP interactions: 3 interactions with chain H, 1 interactions with chain X, 1 Ligand-Water interactions Metal complexes: H:H.79, H:E.83, H:H.158, X:H.183, H2O.35 MN.44: 5 residues within 4Å: Chain H: H.53, H.182, E.186 Chain W: H.80 Ligands: H3L.45 4 PLIP interactions: 3 interactions with chain H, 1 interactions with chain W Metal complexes: H:H.53, H:H.182, H:E.186, W:H.80 MN.49: 5 residues within 4Å: Chain I: H.79, E.83, H.158 Chain Q: H.183 Ligands: H3L.99 5 PLIP interactions: 3 interactions with chain I, 1 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: I:H.79, I:E.83, I:H.158, Q:H.183, H2O.39 MN.50: 5 residues within 4Å: Chain I: H.53, H.182, E.186 Chain R: H.80 Ligands: H3L.51 4 PLIP interactions: 3 interactions with chain I, 1 interactions with chain R Metal complexes: I:H.53, I:H.182, I:E.186, R:H.80 MN.55: 5 residues within 4Å: Chain J: H.79, E.83, H.158 Chain R: H.183 Ligands: H3L.105 5 PLIP interactions: 3 interactions with chain J, 1 interactions with chain R, 1 Ligand-Water interactions Metal complexes: J:H.79, J:E.83, J:H.158, R:H.183, H2O.44 MN.56: 5 residues within 4Å: Chain J: H.53, H.182, E.186 Chain Q: H.80 Ligands: H3L.57 4 PLIP interactions: 3 interactions with chain J, 1 interactions with chain Q Metal complexes: J:H.53, J:H.182, J:E.186, Q:H.80 MN.61: 5 residues within 4Å: Chain K: H.79, E.83, H.158 Chain T: H.183 Ligands: H3L.117 5 PLIP interactions: 3 interactions with chain K, 1 interactions with chain T, 1 Ligand-Water interactions Metal complexes: K:H.79, K:E.83, K:H.158, T:H.183, H2O.49 MN.62: 5 residues within 4Å: Chain K: H.53, H.182, E.186 Chain S: H.80 Ligands: H3L.63 4 PLIP interactions: 3 interactions with chain K, 1 interactions with chain S Metal complexes: K:H.53, K:H.182, K:E.186, S:H.80 MN.67: 5 residues within 4Å: Chain L: H.79, E.83, H.158 Chain S: H.183 Ligands: H3L.111 5 PLIP interactions: 1 interactions with chain S, 3 interactions with chain L, 1 Ligand-Water interactions Metal complexes: S:H.183, L:H.79, L:E.83, L:H.158, H2O.54 MN.68: 5 residues within 4Å: Chain L: H.53, H.182, E.186 Chain T: H.80 Ligands: H3L.69 4 PLIP interactions: 1 interactions with chain T, 3 interactions with chain L Metal complexes: T:H.80, L:H.53, L:H.182, L:E.186 MN.73: 5 residues within 4Å: Chain D: H.183 Chain M: H.79, E.83, H.158 Ligands: H3L.21 5 PLIP interactions: 3 interactions with chain M, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: M:H.79, M:E.83, M:H.158, D:H.183, H2O.59 MN.74: 5 residues within 4Å: Chain C: H.80 Chain M: H.53, H.182, E.186 Ligands: H3L.75 4 PLIP interactions: 3 interactions with chain M, 1 interactions with chain C Metal complexes: M:H.53, M:H.182, M:E.186, C:H.80 MN.79: 5 residues within 4Å: Chain C: H.183 Chain N: H.79, E.83, H.158 Ligands: H3L.15 5 PLIP interactions: 1 interactions with chain C, 3 interactions with chain N, 1 Ligand-Water interactions Metal complexes: C:H.183, N:H.79, N:E.83, N:H.158, H2O.63 MN.80: 5 residues within 4Å: Chain D: H.80 Chain N: H.53, H.182, E.186 Ligands: H3L.81 4 PLIP interactions: 1 interactions with chain D, 3 interactions with chain N Metal complexes: D:H.80, N:H.53, N:H.182, N:E.186 MN.85: 5 residues within 4Å: Chain A: H.183 Chain O: H.79, E.83, H.158 Ligands: H3L.3 5 PLIP interactions: 3 interactions with chain O, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: O:H.79, O:E.83, O:H.158, A:H.183, H2O.68 MN.86: 5 residues within 4Å: Chain B: H.80 Chain O: H.53, H.182, E.186 Ligands: H3L.87 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain O Metal complexes: B:H.80, O:H.53, O:H.182, O:E.186 MN.91: 5 residues within 4Å: Chain B: H.183 Chain P: H.79, E.83, H.158 Ligands: H3L.9 5 PLIP interactions: 3 interactions with chain P, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: P:H.79, P:E.83, P:H.158, B:H.183, H2O.73 MN.92: 5 residues within 4Å: Chain A: H.80 Chain P: H.53, H.182, E.186 Ligands: H3L.93 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain P Metal complexes: A:H.80, P:H.53, P:H.182, P:E.186 MN.97: 5 residues within 4Å: Chain J: H.183 Chain Q: H.79, E.83, H.158 Ligands: H3L.57 5 PLIP interactions: 3 interactions with chain Q, 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: Q:H.79, Q:E.83, Q:H.158, J:H.183, H2O.78 MN.98: 5 residues within 4Å: Chain I: H.80 Chain Q: H.53, H.182, E.186 Ligands: H3L.99 4 PLIP interactions: 1 interactions with chain I, 3 interactions with chain Q Metal complexes: I:H.80, Q:H.53, Q:H.182, Q:E.186 MN.103: 5 residues within 4Å: Chain I: H.183 Chain R: H.79, E.83, H.158 Ligands: H3L.51 5 PLIP interactions: 3 interactions with chain R, 1 interactions with chain I, 1 Ligand-Water interactions Metal complexes: R:H.79, R:E.83, R:H.158, I:H.183, H2O.83 MN.104: 5 residues within 4Å: Chain J: H.80 Chain R: H.53, H.182, E.186 Ligands: H3L.105 4 PLIP interactions: 3 interactions with chain R, 1 interactions with chain J Metal complexes: R:H.53, R:H.182, R:E.186, J:H.80 MN.109: 5 residues within 4Å: Chain K: H.183 Chain S: H.79, E.83, H.158 Ligands: H3L.63 5 PLIP interactions: 1 interactions with chain K, 3 interactions with chain S, 1 Ligand-Water interactions Metal complexes: K:H.183, S:H.79, S:E.83, S:H.158, H2O.87 MN.110: 5 residues within 4Å: Chain L: H.80 Chain S: H.53, H.182, E.186 Ligands: H3L.111 4 PLIP interactions: 3 interactions with chain S, 1 interactions with chain L Metal complexes: S:H.53, S:H.182, S:E.186, L:H.80 MN.115: 5 residues within 4Å: Chain L: H.183 Chain T: H.79, E.83, H.158 Ligands: H3L.69 5 PLIP interactions: 1 interactions with chain L, 3 interactions with chain T, 1 Ligand-Water interactions Metal complexes: L:H.183, T:H.79, T:E.83, T:H.158, H2O.92 MN.116: 5 residues within 4Å: Chain K: H.80 Chain T: H.53, H.182, E.186 Ligands: H3L.117 4 PLIP interactions: 3 interactions with chain T, 1 interactions with chain K Metal complexes: T:H.53, T:H.182, T:E.186, K:H.80 MN.121: 5 residues within 4Å: Chain E: H.183 Chain U: H.79, E.83, H.158 Ligands: H3L.27 5 PLIP interactions: 3 interactions with chain U, 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: U:H.79, U:E.83, U:H.158, E:H.183, H2O.97 MN.122: 5 residues within 4Å: Chain F: H.80 Chain U: H.53, H.182, E.186 Ligands: H3L.123 4 PLIP interactions: 3 interactions with chain U, 1 interactions with chain F Metal complexes: U:H.53, U:H.182, U:E.186, F:H.80 MN.127: 5 residues within 4Å: Chain F: H.183 Chain V: H.79, E.83, H.158 Ligands: H3L.33 5 PLIP interactions: 3 interactions with chain V, 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: V:H.79, V:E.83, V:H.158, F:H.183, H2O.102 MN.128: 5 residues within 4Å: Chain E: H.80 Chain V: H.53, H.182, E.186 Ligands: H3L.129 4 PLIP interactions: 3 interactions with chain V, 1 interactions with chain E Metal complexes: V:H.53, V:H.182, V:E.186, E:H.80 MN.133: 5 residues within 4Å: Chain H: H.183 Chain W: H.79, E.83, H.158 Ligands: H3L.45 5 PLIP interactions: 3 interactions with chain W, 1 interactions with chain H, 1 Ligand-Water interactions Metal complexes: W:H.79, W:E.83, W:H.158, H:H.183, H2O.107 MN.134: 5 residues within 4Å: Chain G: H.80 Chain W: H.53, H.182, E.186 Ligands: H3L.135 4 PLIP interactions: 1 interactions with chain G, 3 interactions with chain W Metal complexes: G:H.80, W:H.53, W:H.182, W:E.186 MN.139: 5 residues within 4Å: Chain G: H.183 Chain X: H.79, E.83, H.158 Ligands: H3L.39 5 PLIP interactions: 3 interactions with chain X, 1 interactions with chain G, 1 Ligand-Water interactions Metal complexes: X:H.79, X:E.83, X:H.158, G:H.183, H2O.111 MN.140: 5 residues within 4Å: Chain H: H.80 Chain X: H.53, H.182, E.186 Ligands: H3L.141 4 PLIP interactions: 3 interactions with chain X, 1 interactions with chain H Metal complexes: X:H.53, X:H.182, X:E.186, H:H.80

24 x H3L: (1S)-1-(2-methyl-1,2,4-triazol-3-yl)ethanamine(Non-covalent)

H3L.3: 12 residues within 4Å: Chain A: H.53, M.113, H.182, H.183, E.186 Chain J: R.127 Chain O: E.27, H.79, H.80, E.83 Ligands: MN.2, MN.85 2 PLIP interactions: 1 interactions with chain O, 1 interactions with chain A Hydrophobic interactions: O:E.27 Hydrogen bonds: A:E.186 H3L.9: 12 residues within 4Å: Chain B: H.53, M.113, H.182, H.183, E.186 Chain K: R.127 Chain P: E.27, H.79, H.80, E.83 Ligands: MN.8, MN.91 2 PLIP interactions: 1 interactions with chain P, 1 interactions with chain B Hydrophobic interactions: P:E.27 Hydrogen bonds: B:E.186 H3L.15: 12 residues within 4Å: Chain C: H.53, M.113, H.182, H.183, E.186 Chain I: R.127 Chain N: E.27, H.79, H.80, E.83 Ligands: MN.14, MN.79 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain N Hydrogen bonds: C:E.186 Hydrophobic interactions: N:E.27 H3L.21: 12 residues within 4Å: Chain D: H.53, M.113, H.182, H.183, E.186 Chain L: R.127 Chain M: E.27, H.79, H.80, E.83 Ligands: MN.20, MN.73 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain M Hydrogen bonds: D:E.186 Hydrophobic interactions: M:E.27 H3L.27: 12 residues within 4Å: Chain B: R.127 Chain E: H.53, M.113, H.182, H.183, E.186 Chain U: E.27, H.79, H.80, E.83 Ligands: MN.26, MN.121 2 PLIP interactions: 1 interactions with chain U, 1 interactions with chain E Hydrophobic interactions: U:E.27 Hydrogen bonds: E:E.186 H3L.33: 12 residues within 4Å: Chain C: R.127 Chain F: H.53, M.113, H.182, H.183, E.186 Chain V: E.27, H.79, H.80, E.83 Ligands: MN.32, MN.127 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain V Hydrogen bonds: F:E.186 Hydrophobic interactions: V:E.27 H3L.39: 12 residues within 4Å: Chain A: R.127 Chain G: H.53, M.113, H.182, H.183, E.186 Chain X: E.27, H.79, H.80, E.83 Ligands: MN.38, MN.139 2 PLIP interactions: 1 interactions with chain X, 1 interactions with chain G Hydrophobic interactions: X:E.27 Hydrogen bonds: G:E.186 H3L.45: 12 residues within 4Å: Chain D: R.127 Chain H: H.53, M.113, H.182, H.183, E.186 Chain W: E.27, H.79, H.80, E.83 Ligands: MN.44, MN.133 2 PLIP interactions: 1 interactions with chain H, 1 interactions with chain W Hydrogen bonds: H:E.186 Hydrophobic interactions: W:E.27 H3L.51: 12 residues within 4Å: Chain F: R.127 Chain I: H.53, M.113, H.182, H.183, E.186 Chain R: E.27, H.79, H.80, E.83 Ligands: MN.50, MN.103 2 PLIP interactions: 1 interactions with chain I, 1 interactions with chain R Hydrogen bonds: I:E.186 Hydrophobic interactions: R:E.27 H3L.57: 12 residues within 4Å: Chain G: R.127 Chain J: H.53, M.113, H.182, H.183, E.186 Chain Q: E.27, H.79, H.80, E.83 Ligands: MN.56, MN.97 2 PLIP interactions: 1 interactions with chain Q, 1 interactions with chain J Hydrophobic interactions: Q:E.27 Hydrogen bonds: J:E.186 H3L.63: 12 residues within 4Å: Chain E: R.127 Chain K: H.53, M.113, H.182, H.183, E.186 Chain S: E.27, H.79, H.80, E.83 Ligands: MN.62, MN.109 2 PLIP interactions: 1 interactions with chain K, 1 interactions with chain S Hydrogen bonds: K:E.186 Hydrophobic interactions: S:E.27 H3L.69: 12 residues within 4Å: Chain H: R.127 Chain L: H.53, M.113, H.182, H.183, E.186 Chain T: E.27, H.79, H.80, E.83 Ligands: MN.68, MN.115 2 PLIP interactions: 1 interactions with chain T, 1 interactions with chain L Hydrophobic interactions: T:E.27 Hydrogen bonds: L:E.186 H3L.75: 12 residues within 4Å: Chain C: E.27, H.79, H.80, E.83 Chain M: H.53, M.113, H.182, H.183, E.186 Chain V: R.127 Ligands: MN.13, MN.74 2 PLIP interactions: 1 interactions with chain M, 1 interactions with chain C Hydrogen bonds: M:E.186 Hydrophobic interactions: C:E.27 H3L.81: 12 residues within 4Å: Chain D: E.27, H.79, H.80, E.83 Chain N: H.53, M.113, H.182, H.183, E.186 Chain W: R.127 Ligands: MN.19, MN.80 2 PLIP interactions: 1 interactions with chain N, 1 interactions with chain D Hydrogen bonds: N:E.186 Hydrophobic interactions: D:E.27 H3L.87: 12 residues within 4Å: Chain B: E.27, H.79, H.80, E.83 Chain O: H.53, M.113, H.182, H.183, E.186 Chain U: R.127 Ligands: MN.7, MN.86 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain O Hydrophobic interactions: B:E.27 Hydrogen bonds: O:E.186 H3L.93: 12 residues within 4Å: Chain A: E.27, H.79, H.80, E.83 Chain P: H.53, M.113, H.182, H.183, E.186 Chain X: R.127 Ligands: MN.1, MN.92 2 PLIP interactions: 1 interactions with chain P, 1 interactions with chain A Hydrogen bonds: P:E.186 Hydrophobic interactions: A:E.27 H3L.99: 12 residues within 4Å: Chain I: E.27, H.79, H.80, E.83 Chain N: R.127 Chain Q: H.53, M.113, H.182, H.183, E.186 Ligands: MN.49, MN.98 2 PLIP interactions: 1 interactions with chain I, 1 interactions with chain Q Hydrophobic interactions: I:E.27 Hydrogen bonds: Q:E.186 H3L.105: 12 residues within 4Å: Chain J: E.27, H.79, H.80, E.83 Chain O: R.127 Chain R: H.53, M.113, H.182, H.183, E.186 Ligands: MN.55, MN.104 2 PLIP interactions: 1 interactions with chain R, 1 interactions with chain J Hydrogen bonds: R:E.186 Hydrophobic interactions: J:E.27 H3L.111: 12 residues within 4Å: Chain L: E.27, H.79, H.80, E.83 Chain M: R.127 Chain S: H.53, M.113, H.182, H.183, E.186 Ligands: MN.67, MN.110 2 PLIP interactions: 1 interactions with chain L, 1 interactions with chain S Hydrophobic interactions: L:E.27 Hydrogen bonds: S:E.186 H3L.117: 12 residues within 4Å: Chain K: E.27, H.79, H.80, E.83 Chain P: R.127 Chain T: H.53, M.113, H.182, H.183, E.186 Ligands: MN.61, MN.116 2 PLIP interactions: 1 interactions with chain T, 1 interactions with chain K Hydrogen bonds: T:E.186 Hydrophobic interactions: K:E.27 H3L.123: 12 residues within 4Å: Chain F: E.27, H.79, H.80, E.83 Chain R: R.127 Chain U: H.53, M.113, H.182, H.183, E.186 Ligands: MN.31, MN.122 2 PLIP interactions: 1 interactions with chain U, 1 interactions with chain F Hydrogen bonds: U:E.186 Hydrophobic interactions: F:E.27 H3L.129: 12 residues within 4Å: Chain E: E.27, H.79, H.80, E.83 Chain S: R.127 Chain V: H.53, M.113, H.182, H.183, E.186 Ligands: MN.25, MN.128 2 PLIP interactions: 1 interactions with chain V, 1 interactions with chain E Hydrogen bonds: V:E.186 Hydrophobic interactions: E:E.27 H3L.135: 12 residues within 4Å: Chain G: E.27, H.79, H.80, E.83 Chain Q: R.127 Chain W: H.53, M.113, H.182, H.183, E.186 Ligands: MN.37, MN.134 2 PLIP interactions: 1 interactions with chain W, 1 interactions with chain G Hydrogen bonds: W:E.186 Hydrophobic interactions: G:E.27 H3L.141: 12 residues within 4Å: Chain H: E.27, H.79, H.80, E.83 Chain T: R.127 Chain X: H.53, M.113, H.182, H.183, E.186 Ligands: MN.43, MN.140 2 PLIP interactions: 1 interactions with chain H, 1 interactions with chain X Hydrophobic interactions: H:E.27 Hydrogen bonds: X:E.186

24 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 5 residues within 4Å: Chain A: C.130, H.132, R.157, E.161 Ligands: GOL.142 Ligand excluded by PLIP GOL.10: 5 residues within 4Å: Chain B: C.130, H.132, R.157, E.161 Ligands: GOL.124 Ligand excluded by PLIP GOL.16: 5 residues within 4Å: Chain C: C.130, H.132, R.157, E.161 Ligands: GOL.130 Ligand excluded by PLIP GOL.22: 5 residues within 4Å: Chain D: C.130, H.132, R.157, E.161 Ligands: GOL.136 Ligand excluded by PLIP GOL.28: 5 residues within 4Å: Chain E: C.130, H.132, R.157, E.161 Ligands: GOL.112 Ligand excluded by PLIP GOL.34: 5 residues within 4Å: Chain F: C.130, H.132, R.157, E.161 Ligands: GOL.106 Ligand excluded by PLIP GOL.40: 5 residues within 4Å: Chain G: C.130, H.132, R.157, E.161 Ligands: GOL.100 Ligand excluded by PLIP GOL.46: 5 residues within 4Å: Chain H: C.130, H.132, R.157, E.161 Ligands: GOL.118 Ligand excluded by PLIP GOL.52: 5 residues within 4Å: Chain I: C.130, H.132, R.157, E.161 Ligands: GOL.82 Ligand excluded by PLIP GOL.58: 5 residues within 4Å: Chain J: C.130, H.132, R.157, E.161 Ligands: GOL.88 Ligand excluded by PLIP GOL.64: 5 residues within 4Å: Chain K: C.130, H.132, R.157, E.161 Ligands: GOL.94 Ligand excluded by PLIP GOL.70: 5 residues within 4Å: Chain L: C.130, H.132, R.157, E.161 Ligands: GOL.76 Ligand excluded by PLIP GOL.76: 5 residues within 4Å: Chain M: C.130, H.132, R.157, E.161 Ligands: GOL.70 Ligand excluded by PLIP GOL.82: 5 residues within 4Å: Chain N: C.130, H.132, R.157, E.161 Ligands: GOL.52 Ligand excluded by PLIP GOL.88: 5 residues within 4Å: Chain O: C.130, H.132, R.157, E.161 Ligands: GOL.58 Ligand excluded by PLIP GOL.94: 5 residues within 4Å: Chain P: C.130, H.132, R.157, E.161 Ligands: GOL.64 Ligand excluded by PLIP GOL.100: 5 residues within 4Å: Chain Q: C.130, H.132, R.157, E.161 Ligands: GOL.40 Ligand excluded by PLIP GOL.106: 5 residues within 4Å: Chain R: C.130, H.132, R.157, E.161 Ligands: GOL.34 Ligand excluded by PLIP GOL.112: 5 residues within 4Å: Chain S: C.130, H.132, R.157, E.161 Ligands: GOL.28 Ligand excluded by PLIP GOL.118: 5 residues within 4Å: Chain T: C.130, H.132, R.157, E.161 Ligands: GOL.46 Ligand excluded by PLIP GOL.124: 5 residues within 4Å: Chain U: C.130, H.132, R.157, E.161 Ligands: GOL.10 Ligand excluded by PLIP GOL.130: 5 residues within 4Å: Chain V: C.130, H.132, R.157, E.161 Ligands: GOL.16 Ligand excluded by PLIP GOL.136: 5 residues within 4Å: Chain W: C.130, H.132, R.157, E.161 Ligands: GOL.22 Ligand excluded by PLIP GOL.142: 5 residues within 4Å: Chain X: C.130, H.132, R.157, E.161 Ligands: GOL.4 Ligand excluded by PLIP

48 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.41, CL.59 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: R.105 Chain G: H.61, K.190 Ligand excluded by PLIP CL.11: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.29, CL.65 Ligand excluded by PLIP CL.12: 3 residues within 4Å: Chain B: R.105 Chain E: H.61, K.190 Ligand excluded by PLIP CL.17: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.35, CL.53 Ligand excluded by PLIP CL.18: 3 residues within 4Å: Chain C: R.105 Chain F: H.61, K.190 Ligand excluded by PLIP CL.23: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.47, CL.71 Ligand excluded by PLIP CL.24: 3 residues within 4Å: Chain D: R.105 Chain H: H.61, K.190 Ligand excluded by PLIP CL.29: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.11, CL.65 Ligand excluded by PLIP CL.30: 3 residues within 4Å: Chain E: R.105 Chain K: H.61, K.190 Ligand excluded by PLIP CL.35: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.17, CL.53 Ligand excluded by PLIP CL.36: 3 residues within 4Å: Chain F: R.105 Chain I: H.61, K.190 Ligand excluded by PLIP CL.41: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.5, CL.59 Ligand excluded by PLIP CL.42: 3 residues within 4Å: Chain G: R.105 Chain J: H.61, K.190 Ligand excluded by PLIP CL.47: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.23, CL.71 Ligand excluded by PLIP CL.48: 3 residues within 4Å: Chain H: R.105 Chain L: H.61, K.190 Ligand excluded by PLIP CL.53: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.17, CL.35 Ligand excluded by PLIP CL.54: 3 residues within 4Å: Chain C: H.61, K.190 Chain I: R.105 Ligand excluded by PLIP CL.59: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.5, CL.41 Ligand excluded by PLIP CL.60: 3 residues within 4Å: Chain A: H.61, K.190 Chain J: R.105 Ligand excluded by PLIP CL.65: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.11, CL.29 Ligand excluded by PLIP CL.66: 3 residues within 4Å: Chain B: H.61, K.190 Chain K: R.105 Ligand excluded by PLIP CL.71: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.23, CL.47 Ligand excluded by PLIP CL.72: 3 residues within 4Å: Chain D: H.61, K.190 Chain L: R.105 Ligand excluded by PLIP CL.77: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.113, CL.131 Ligand excluded by PLIP CL.78: 3 residues within 4Å: Chain M: R.105 Chain S: H.61, K.190 Ligand excluded by PLIP CL.83: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.101, CL.137 Ligand excluded by PLIP CL.84: 3 residues within 4Å: Chain N: R.105 Chain Q: H.61, K.190 Ligand excluded by PLIP CL.89: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.107, CL.125 Ligand excluded by PLIP CL.90: 3 residues within 4Å: Chain O: R.105 Chain R: H.61, K.190 Ligand excluded by PLIP CL.95: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.119, CL.143 Ligand excluded by PLIP CL.96: 3 residues within 4Å: Chain P: R.105 Chain T: H.61, K.190 Ligand excluded by PLIP CL.101: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.83, CL.137 Ligand excluded by PLIP CL.102: 3 residues within 4Å: Chain Q: R.105 Chain W: H.61, K.190 Ligand excluded by PLIP CL.107: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.89, CL.125 Ligand excluded by PLIP CL.108: 3 residues within 4Å: Chain R: R.105 Chain U: H.61, K.190 Ligand excluded by PLIP CL.113: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.77, CL.131 Ligand excluded by PLIP CL.114: 3 residues within 4Å: Chain S: R.105 Chain V: H.61, K.190 Ligand excluded by PLIP CL.119: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.95, CL.143 Ligand excluded by PLIP CL.120: 3 residues within 4Å: Chain T: R.105 Chain X: H.61, K.190 Ligand excluded by PLIP CL.125: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.89, CL.107 Ligand excluded by PLIP CL.126: 3 residues within 4Å: Chain O: H.61, K.190 Chain U: R.105 Ligand excluded by PLIP CL.131: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.77, CL.113 Ligand excluded by PLIP CL.132: 3 residues within 4Å: Chain M: H.61, K.190 Chain V: R.105 Ligand excluded by PLIP CL.137: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.83, CL.101 Ligand excluded by PLIP CL.138: 3 residues within 4Å: Chain N: H.61, K.190 Chain W: R.105 Ligand excluded by PLIP CL.143: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.95, CL.119 Ligand excluded by PLIP CL.144: 3 residues within 4Å: Chain P: H.61, K.190 Chain X: R.105 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tiwari, S. et al., Crystal structure of M.tuberculosis imidazole glycerol phosphate dehydratase in complex with an inhibitor. To Be Published

Release Date

2021-11-10

Peptides

Imidazoleglycerol-phosphate dehydratase: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Imidazoleglycerol-phosphate dehydratase

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