SMTL ID : 7dua.1

Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with 4-amino-7-(1-methylcyclopropyl)-N-(5-methyl-1H-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

2 x HJ0: 4-azanyl-7-(1-methylcyclopropyl)-~{N}-(5-methyl-1~{H}-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide(Non-covalent)

HJ0.1: 17 residues within 4Å: Chain A: L.31, G.32, F.36, V.39, A.57, K.59, E.76, L.80, L.103, V.105, E.106, Y.107, A.108, S.112, L.182, S.192, D.193 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.31, A:F.36, A:V.39, A:L.80, A:L.103, A:V.105, A:V.105, A:L.182, A:L.182 Hydrogen bonds: A:K.59, A:E.76, A:E.106, A:A.108, A:D.193 Water bridges: A:S.192, A:S.192 HJ0.2: 16 residues within 4Å: Chain B: L.31, G.32, F.36, V.39, A.57, K.59, E.76, L.80, L.103, V.105, E.106, A.108, S.112, L.182, S.192, D.193 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:L.31, B:F.36, B:V.39, B:L.80, B:L.103, B:V.105, B:L.182 Hydrogen bonds: B:K.59, B:E.76, B:E.106, B:A.108, B:D.193 Water bridges: B:S.192, B:S.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyazaki, I. et al., Selective RET inhibitor TAS0953/HM06. To be published

Release Date

2022-01-12

Peptides

Proto-oncogene tyrosine-protein kinase receptor Ret: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proto-oncogene tyrosine-protein kinase receptor Ret

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