SMTL ID : 7hor.1

PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0014712-001

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

hetero-1-1-mer

Ligands

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 6 residues within 4Å: Chain B: Y.121, A.123, S.126, Y.152 Ligands: DMS.3, 01.4 1 PLIP interactions: 1 interactions with chain B pi-Cation interactions: B:Y.152 DMS.2: 3 residues within 4Å: Chain B: K.45, G.46, A.47 No protein-ligand interaction detected (PLIP) DMS.3: 6 residues within 4Å: Chain B: G.142, N.143, G.144, Y.152 Ligands: DMS.1, 01.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.144

1 x 01: (2P)-2-(2-methoxypyridin-4-yl)-N-(1-methyl-1H-pyrazol-4-yl)benzamide

01.4: 10 residues within 4Å: Chain B: H.42, Y.121, P.122, A.123, S.126, G.142, N.143, Y.152 Ligands: DMS.1, DMS.3 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Y.152 Water bridges: B:S.126 pi-Stacking: B:H.42, B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., PanDDA analysis group deposition. To Be Published

Release Date

2025-02-26

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

Related Entries With Identical Sequence