SMTL ID : 7hpb.1

PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015080-001

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain B: K.45, G.46, A.47 No protein-ligand interaction detected (PLIP)

1 x 01: N-{3-chloro-5-[(1-hydroxy-2-methylpropan-2-yl)carbamoyl]phenyl}-2-methyl-3-oxo-2,3-dihydro-1,2-oxazole-5-carboxamide

01.2: 12 residues within 4Å: Chain A: D.40 Chain B: H.42, D.120, Y.121, P.122, A.123, S.126, Y.141, G.142, N.143, G.144, Y.152 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:A.123 Hydrogen bonds: B:D.120, B:Y.121, B:Y.121, B:A.123, B:G.144 Water bridges: B:A.123, B:S.126 pi-Stacking: B:H.42, B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., PanDDA analysis group deposition. To Be Published

Release Date

2025-02-26

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

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