- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-1-mer
- Ligands
- 6 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 44 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.7: 2 residues within 4Å:- Chain A: N.331, Q.580
Ligand excluded by PLIPNAG.8: 2 residues within 4Å:- Chain A: I.1132, N.1134
Ligand excluded by PLIPNAG.9: 4 residues within 4Å:- Chain A: N.1098, T.1100, H.1101, F.1103
Ligand excluded by PLIPNAG.10: 3 residues within 4Å:- Chain A: N.280, N.282
- Chain C: K.558
Ligand excluded by PLIPNAG.11: 2 residues within 4Å:- Chain A: N.616, T.618
Ligand excluded by PLIPNAG.12: 2 residues within 4Å:- Chain A: N.801, S.803
Ligand excluded by PLIPNAG.13: 3 residues within 4Å:- Chain A: N.709, G.1131
- Chain B: D.796
Ligand excluded by PLIPNAG.14: 1 residues within 4Å:- Chain A: N.1074
Ligand excluded by PLIPNAG.15: 2 residues within 4Å:- Chain A: Y.28, N.61
Ligand excluded by PLIPNAG.16: 1 residues within 4Å:- Chain A: N.234
Ligand excluded by PLIPNAG.17: 1 residues within 4Å:- Chain A: N.603
Ligand excluded by PLIPNAG.18: 5 residues within 4Å:- Chain A: S.112, E.132, N.164, N.165
- Chain C: R.357
Ligand excluded by PLIPNAG.19: 1 residues within 4Å:- Chain A: N.657
Ligand excluded by PLIPNAG.20: 2 residues within 4Å:- Chain B: N.331, Q.580
Ligand excluded by PLIPNAG.21: 2 residues within 4Å:- Chain B: I.1132, N.1134
Ligand excluded by PLIPNAG.22: 4 residues within 4Å:- Chain B: N.1098, T.1100, H.1101, F.1103
Ligand excluded by PLIPNAG.23: 3 residues within 4Å:- Chain B: N.280, E.281, N.282
Ligand excluded by PLIPNAG.24: 1 residues within 4Å:- Chain B: N.616
Ligand excluded by PLIPNAG.25: 2 residues within 4Å:- Chain B: N.801, S.803
Ligand excluded by PLIPNAG.26: 2 residues within 4Å:- Chain B: N.709, G.1131
Ligand excluded by PLIPNAG.27: 1 residues within 4Å:- Chain B: N.1074
Ligand excluded by PLIPNAG.28: 4 residues within 4Å:- Chain B: Y.28, N.30, F.59, N.61
Ligand excluded by PLIPNAG.29: 1 residues within 4Å:- Chain B: N.603
Ligand excluded by PLIPNAG.30: 5 residues within 4Å:- Chain B: S.112, K.113, E.132, N.164, N.165
Ligand excluded by PLIPNAG.31: 1 residues within 4Å:- Chain B: N.657
Ligand excluded by PLIPNAG.32: 4 residues within 4Å:- Chain C: N.331, P.579, Q.580, L.582
Ligand excluded by PLIPNAG.33: 1 residues within 4Å:- Chain C: N.1134
Ligand excluded by PLIPNAG.34: 4 residues within 4Å:- Chain C: N.1098, T.1100, H.1101, F.1103
Ligand excluded by PLIPNAG.35: 2 residues within 4Å:- Chain B: K.558
- Chain C: N.282
Ligand excluded by PLIPNAG.36: 1 residues within 4Å:- Chain C: N.657
Ligand excluded by PLIPNAG.37: 1 residues within 4Å:- Chain C: N.616
Ligand excluded by PLIPNAG.38: 2 residues within 4Å:- Chain C: N.801, Q.804
Ligand excluded by PLIPNAG.39: 2 residues within 4Å:- Chain C: N.709, G.1131
Ligand excluded by PLIPNAG.40: 1 residues within 4Å:- Chain C: N.1074
Ligand excluded by PLIPNAG.41: 3 residues within 4Å:- Chain C: Y.28, F.59, N.61
Ligand excluded by PLIPNAG.42: 3 residues within 4Å:- Chain B: E.465
- Chain C: N.234, T.236
Ligand excluded by PLIPNAG.43: 4 residues within 4Å:- Chain C: S.112, E.132, N.164, N.165
Ligand excluded by PLIPNAG.44: 6 residues within 4Å:- Chain C: F.338, G.339, F.342, N.343, S.371, S.373
Ligand excluded by PLIPNAG.45: 2 residues within 4Å:- Chain C: E.309, N.603
Ligand excluded by PLIPNAG.46: 2 residues within 4Å:- Chain D: E.294, N.304
Ligand excluded by PLIPNAG.47: 2 residues within 4Å:- Chain D: D.413, N.414
Ligand excluded by PLIPNAG.48: 5 residues within 4Å:- Chain D: Q.63, N.85, V.89, A.175, N.176
Ligand excluded by PLIPNAG.49: 3 residues within 4Å:- Chain D: Q.71, N.72, T.74
Ligand excluded by PLIPNAG.50: 3 residues within 4Å:- Chain D: N.35, I.36, T.37
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhou, T. et al., Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe (2020)
- Release Date
- 2020-12-16
- Peptides
- Spike glycoprotein: ABC
Angiotensin-converting enzyme 2: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
AC
BD
D
SMTL ID : 7kne.1
Cryo-EM structure of single ACE2-bound SARS-CoV-2 trimer spike at pH 5.5
Spike glycoprotein
Toggle Identical (AB)Angiotensin-converting enzyme 2
Related Entries With Identical Sequence
2ajf.1 | 2ajf.2 | 3kbh.1 | 3kbh.2 | 6vsb.1 | 6vw1.1 | 6vw1.2 | 6xey.1 | 6zow.1 | 6zp5.1 | 6zp7.1 | 6zxn.1 | 7a29.1 | 7b18.1 | 7ddo.1 | 7ddp.1 | 7dx4.1 | 7kkk.1 | 7kkl.1 | 7kmb.1 | 7kms.1 | 7kmz.1 | 7knb.1 | 7knh.1 | 7kni.1 | 7ks9.1 | 7ksg.1 | 7l0n.1 | 7l0n.2 | 7l2d.1 more...less...7l2e.1 | 7l2f.1 | 7l56.1 | 7l57.1 | 7l58.1 | 7ljr.1 | 7ls9.1 | 7lss.1 | 7mw2.1 | 7mw3.1 | 7mw4.1 | 7mw5.1 | 7mw6.1 | 7n5h.1 | 7p77.1 | 7p78.1 | 7p79.1 | 7q1z.1 | 7rw2.1 | 7u0n.1 | 7u0n.2 | 7ufk.1 | 7ufk.2 | 7vib.1 | 7vib.2 | 7vx9.1 | 7x7n.1 | 7yeg.1 | 8dxs.1 | 8hrk.1 | 8hrl.1 | 8jwh.1 | 8sph.1 | 8sph.2 | 8spi.1 | 8spi.2 | 8whs.1 | 8whu.1 | 8whz.1