SMTL ID : 7lvi.1 (1 other biounit)

CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 ISOFORM 1 COMPLEXED WITH LIGAND (2R)-2-AMINO-N-[3-METHOXY-4- (1,3-OXAZOL-5-YL)PHENYL]-4-METHYLPENTANAMIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x YFY: (2R,3R)-N-[3-methoxy-4-(1,3-oxazol-5-yl)phenyl]-3-(propan-2-yl)piperidine-2-carboxamide(Non-covalent)

YFY.1: 21 residues within 4Å: Chain A: L.40, A.41, E.42, G.43, A.46, L.47, V.48, A.60, K.62, V.92, M.114, D.115, F.116, C.117, Q.121, K.166, E.168, N.169, L.171, C.181, D.182 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.46, A:V.48, A:V.48 Hydrogen bonds: A:C.117, A:D.182, A:D.182

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Y.22, R.25, R.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.22 Salt bridges: A:R.25, A:R.63 SO4.3: 3 residues within 4Å: Chain A: K.206, L.211, R.214 3 PLIP interactions: 3 interactions with chain A Water bridges: A:L.211, A:L.211 Salt bridges: A:R.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hartz, R.A. et al., Discovery, Structure-Activity Relationships, and In Vivo Evaluation of Novel Aryl Amides as Brain Penetrant Adaptor Protein 2-Associated Kinase 1 (AAK1) Inhibitors for the Treatment of Neuropathic Pain. J.Med.Chem. (2021)

Release Date

2021-07-28

Peptides

AP2-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

AP2-associated protein kinase 1

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