SMTL ID : 7lvi.2 (1 other biounit)

CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 ISOFORM 1 COMPLEXED WITH LIGAND (2R)-2-AMINO-N-[3-METHOXY-4- (1,3-OXAZOL-5-YL)PHENYL]-4-METHYLPENTANAMIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x YFV: 5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine(Non-covalent)

YFV.1: 19 residues within 4Å: Chain A: L.40, A.41, E.42, G.43, A.46, V.48, A.60, K.62, V.92, M.114, D.115, F.116, C.117, Q.121, E.168, N.169, L.171, C.181, D.182 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.40, A:A.41, A:V.48, A:F.116, A:L.171, A:D.182 Hydrogen bonds: A:C.117, A:E.168

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: K.242, T.247, L.248 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.247, A:L.248 Water bridges: A:S.212, A:K.242, A:K.242 Salt bridges: A:K.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hartz, R.A. et al., Discovery, Structure-Activity Relationships, and In Vivo Evaluation of Novel Aryl Amides as Brain Penetrant Adaptor Protein 2-Associated Kinase 1 (AAK1) Inhibitors for the Treatment of Neuropathic Pain. J.Med.Chem. (2021)

Release Date

2021-07-28

Peptides

AP2-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

AP2-associated protein kinase 1

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