- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 6.56 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.1: 29 residues within 4Å:- Chain A: F.119, Y.147, P.150, L.151, S.153, A.154, V.157, F.182, M.183, I.184, F.186, Q.187, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, I.290
- Chain D: L.182, L.205
- Chain N: F.17
- Ligands: CLA.2, CLA.3, PHO.4, CLA.67, LMG.69
19 PLIP interactions:15 interactions with chain A, 3 interactions with chain D, 1 interactions with chain N,- Hydrophobic interactions: A:F.119, A:Y.147, A:P.150, A:A.154, A:F.186, A:Q.187, A:L.193, A:L.193, A:V.202, A:V.205, A:F.206, D:L.182, D:L.182, D:L.205, N:F.17
- pi-Stacking: A:H.198, A:H.198, A:H.198
- Metal complexes: A:H.198
CLA.2: 20 residues within 4Å:- Chain A: T.45, V.157, F.158, M.172, I.176, T.179, F.180, M.183
- Chain D: M.198, V.201, A.202, G.206
- Chain K: L.30
- Chain N: F.10
- Ligands: CLA.1, PHO.4, LMG.10, PL9.66, CLA.67, LMG.69
7 PLIP interactions:3 interactions with chain A, 2 interactions with chain D, 2 interactions with chain N,- Hydrophobic interactions: A:V.157, A:F.158, A:F.180, D:V.201, D:A.202, N:F.10, N:F.10
CLA.3: 22 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, F.211, W.278
- Chain D: F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.1, PL9.6, DGD.62, PHO.65, CLA.67, LMG.68, PL9.84
13 PLIP interactions:7 interactions with chain A, 6 interactions with chain D,- Hydrophobic interactions: A:V.202, A:L.210, A:F.211, A:W.278, D:F.157, D:F.157, D:F.173, D:F.181, D:L.182, D:L.182
- Hydrogen bonds: A:Q.199
- pi-Stacking: A:F.206, A:F.206
CLA.5: 23 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.11, V.12, F.15
- Ligands: DGD.7, SQD.14, CLA.49, BCR.81, LMG.82, LMT.113
18 PLIP interactions:6 interactions with chain H, 12 interactions with chain A,- Hydrophobic interactions: H:V.8, H:V.11, H:V.12, H:V.12, H:F.15, A:I.36, A:P.39, A:T.40, A:F.93, A:I.96, A:W.97, A:L.121
- Hydrogen bonds: H:Y.9, A:I.96
- Salt bridges: A:H.118
- pi-Stacking: A:H.118, A:H.118
- Metal complexes: A:H.118
CLA.15: 9 residues within 4Å:- Chain B: W.185, P.187, F.190, I.207, V.208
- Chain G: F.40, I.43
- Ligands: CLA.16, BCR.80
10 PLIP interactions:7 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:W.185, B:W.185, B:W.185, B:P.187, B:F.190, B:I.207, B:V.208, G:F.40, G:F.40, G:I.43
CLA.16: 25 residues within 4Å:- Chain B: E.184, G.189, F.190, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250
- Chain D: V.154, I.159, L.162
- Chain G: F.37, F.40, I.44, L.45, Y.48
- Ligands: CLA.15, CLA.17, CLA.19, CLA.22, DGD.35
22 PLIP interactions:14 interactions with chain B, 3 interactions with chain D, 5 interactions with chain G,- Hydrophobic interactions: B:F.190, B:A.200, B:H.201, B:A.205, B:V.208, B:V.208, B:F.246, B:F.247, B:F.250, B:F.250, D:V.154, D:I.159, D:L.162, G:F.37, G:I.44, G:L.45, G:L.45
- pi-Stacking: B:F.190, B:H.201, B:H.201, G:F.40
- Metal complexes: B:H.201
CLA.17: 24 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, F.247, A.248, V.252, T.262
- Chain G: F.37, L.38, L.41
- Ligands: CLA.16, CLA.18, CLA.19, CLA.20, CLA.23, BCR.80
11 PLIP interactions:10 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:L.149, B:F.153, B:F.153, B:A.248, B:V.252, B:T.262, G:F.37
- Salt bridges: B:R.68
- pi-Stacking: B:H.201, B:H.202, B:H.202
CLA.18: 24 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.17, CLA.19, CLA.21, CLA.24, CLA.25, CLA.26, CLA.27, CLA.29, LMT.39
20 PLIP interactions:20 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:L.145, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.458, B:F.458, B:F.458, B:F.462
- Salt bridges: B:R.68
- pi-Stacking: B:F.451, B:H.455, B:H.455
- pi-Cation interactions: B:H.455
- Metal complexes: B:H.455
CLA.19: 27 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, G.147, C.150, A.205, G.209
- Ligands: CLA.16, CLA.17, CLA.18, CLA.20, CLA.23, CLA.24, CLA.26, CLA.29, BCR.34
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.143
- Salt bridges: B:R.68
- pi-Stacking: B:H.100, B:H.100
CLA.20: 22 residues within 4Å:- Chain B: L.69, V.71, W.91, V.96, A.99, H.100, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.17, CLA.19, CLA.30, BCR.34, LMT.39, SQD.95
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.69, B:V.71, B:W.91, B:W.91, B:W.91, B:V.96, B:A.99, B:L.103, B:L.103, B:L.106, B:L.149, B:F.156, B:F.162
- pi-Stacking: B:H.157, B:H.157
- Metal complexes: B:H.157
CLA.21: 24 residues within 4Å:- Chain B: W.33, M.37, Y.40, Q.58, G.59, F.61, T.327, G.328, P.329, W.450, F.451, A.454, F.458
- Chain D: T.277, M.281
- Chain K: L.27
- Chain L: F.14
- Ligands: CLA.18, CLA.27, BCR.31, BCR.32, BCR.33, LMG.36, LMG.37
13 PLIP interactions:1 interactions with chain D, 10 interactions with chain B, 1 interactions with chain L, 1 interactions with chain K,- Hydrophobic interactions: D:T.277, B:Y.40, B:F.61, B:T.327, B:W.450, B:W.450, B:A.454, B:F.458, L:F.14, K:L.27
- Hydrogen bonds: B:G.328
- pi-Stacking: B:F.61, B:W.450
CLA.22: 22 residues within 4Å:- Chain B: T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, L.474
- Chain D: F.120, I.123, M.126, L.127, F.130
- Chain G: L.42
- Ligands: CLA.16, CLA.23, CLA.24, SQD.38, CLA.70
17 PLIP interactions:10 interactions with chain B, 7 interactions with chain D,- Hydrophobic interactions: B:A.243, B:F.246, B:F.247, B:F.463, B:I.467, B:L.474, D:F.120, D:F.120, D:M.126, D:L.127, D:L.127, D:L.127, D:F.130
- pi-Stacking: B:H.466, B:H.466
- pi-Cation interactions: B:H.466
- Metal complexes: B:H.466
CLA.23: 24 residues within 4Å:- Chain B: F.139, L.143, V.208, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229
- Chain D: F.120
- Chain G: T.26, T.27, M.30, F.33, M.34, L.45
- Ligands: CLA.17, CLA.19, CLA.22, CLA.24, BCR.80
15 PLIP interactions:4 interactions with chain G, 10 interactions with chain B, 1 interactions with chain D,- Hydrophobic interactions: G:T.26, G:M.30, G:F.33, G:L.45, B:F.139, B:F.139, B:L.143, B:V.208, B:A.212, B:F.215, B:L.229, D:F.120
- Salt bridges: B:H.216
- pi-Stacking: B:H.216, B:H.216
CLA.24: 19 residues within 4Å:- Chain B: H.23, L.135, F.139, H.142, L.143, A.146, L.229, M.231, T.236, V.237, S.240, S.241
- Ligands: CLA.18, CLA.19, CLA.22, CLA.23, CLA.26, CLA.29, BCR.80
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.135, B:L.229, B:M.231, B:T.236, B:V.237
- Hydrogen bonds: B:H.142
- Salt bridges: B:H.142
CLA.25: 21 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: LMG.10, CLA.18, CLA.26, CLA.27, CLA.28, LMG.36
18 PLIP interactions:18 interactions with chain B,- Hydrophobic interactions: B:W.5, B:W.5, B:V.8, B:H.9, B:T.10, B:L.238, B:I.242, B:I.242, B:F.462, B:F.462, B:F.464
- Hydrogen bonds: B:H.9
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468, B:H.469, B:H.469
- Metal complexes: B:H.469
CLA.26: 23 residues within 4Å:- Chain B: H.9, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.18, CLA.19, CLA.24, CLA.25, CLA.27, CLA.28, CLA.29
19 PLIP interactions:19 interactions with chain B,- Hydrophobic interactions: B:H.9, B:L.12, B:L.12, B:L.19, B:A.22, B:H.23, B:T.27, B:V.30, B:I.234, B:E.235, B:V.237, B:L.238, B:L.238, B:V.245
- Hydrogen bonds: B:S.241
- pi-Stacking: B:H.26
- pi-Cation interactions: B:H.23, B:H.23
- Metal complexes: B:H.23
CLA.27: 16 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, L.461, F.462
- Ligands: CLA.18, CLA.21, CLA.25, CLA.26, CLA.28, BCR.31, BCR.33, LMG.36, LMG.37
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.29, B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462, B:F.462
- Salt bridges: B:H.9
- pi-Stacking: B:H.26, B:H.26, B:H.26
- pi-Cation interactions: B:H.26
- Metal complexes: B:H.26
CLA.28: 17 residues within 4Å:- Chain 7: F.8
- Chain B: V.8, H.9, V.11, L.12, M.25, W.115
- Chain K: V.10
- Chain L: F.21
- Ligands: LMG.10, CLA.25, CLA.26, CLA.27, BCR.31, LMG.37, SQD.41, LMG.180
10 PLIP interactions:9 interactions with chain B, 1 interactions with chain 7,- Hydrophobic interactions: B:V.8, B:V.8, B:V.8, B:L.12, B:M.25, B:W.115, 7:F.8
- pi-Stacking: B:H.9, B:H.9
- Metal complexes: B:H.9
CLA.29: 17 residues within 4Å:- Chain B: I.20, H.23, L.24, L.133, M.138, I.141, H.142, L.145
- Chain G: L.6, L.13, N.14
- Ligands: CLA.18, CLA.19, CLA.24, CLA.26, CLA.30, BCR.34
9 PLIP interactions:6 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.133, B:L.145, G:L.6, G:L.13, G:N.14
- pi-Stacking: B:H.142
- pi-Cation interactions: B:H.142
- Metal complexes: B:H.142
CLA.30: 15 residues within 4Å:- Chain B: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.4, L.6, G.7
- Ligands: CLA.20, CLA.29, BCR.34, SQD.95
13 PLIP interactions:12 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:A.110, B:W.113, B:L.120, B:L.122, B:F.123, G:L.6
- pi-Stacking: B:W.113, B:W.113, B:H.114, B:H.114
- Metal complexes: B:H.114
CLA.45: 20 residues within 4Å:- Chain C: L.83, L.156, G.159, A.160, L.163, L.173, I.212, V.221, H.225, I.228, A.266, M.270, F.277, V.284, Y.285
- Ligands: CLA.46, CLA.47, CLA.50, CLA.51, BCR.56
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:L.156, C:L.163, C:I.212, C:I.228, C:A.266, C:M.270, C:F.277, C:V.284, C:V.284
- Hydrogen bonds: C:Y.285
- pi-Stacking: C:H.225, C:H.225
- Metal complexes: C:H.225
CLA.46: 25 residues within 4Å:- Chain C: W.51, H.79, L.83, W.85, G.159, L.162, L.163, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.45, CLA.47, CLA.48, CLA.53, CLA.55, CLA.59
20 PLIP interactions:20 interactions with chain C,- Hydrophobic interactions: C:W.51, C:W.51, C:L.83, C:W.85, C:L.162, C:L.162, C:L.163, C:F.170, C:L.267, C:M.270, C:A.274, C:L.414, C:L.421, C:F.425
- Hydrogen bonds: C:Y.285
- Salt bridges: C:H.79
- pi-Stacking: C:H.418, C:H.418
- pi-Cation interactions: C:H.418
- Metal complexes: C:H.418
CLA.47: 22 residues within 4Å:- Chain C: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.162, M.270
- Ligands: CLA.45, CLA.46, CLA.51, CLA.53, CLA.55, CLA.59, LMG.64
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:I.48, C:V.49, C:A.52, C:L.83, C:W.85, C:V.102, C:L.162
- Salt bridges: C:H.79
- pi-Stacking: C:H.106, C:H.106, C:H.106
- Metal complexes: C:H.106
CLA.48: 20 residues within 4Å:- Chain A: F.285
- Chain C: W.51, M.55, F.58, Q.72, G.73, I.75, L.392, W.413, S.417
- Chain J: P.17, V.18, V.21
- Ligands: LHG.8, CLA.46, CLA.52, CLA.55, DGD.60, DGD.62, LMG.63
8 PLIP interactions:6 interactions with chain C, 1 interactions with chain J, 1 interactions with chain A,- Hydrophobic interactions: C:W.51, C:I.75, C:I.75, C:L.392, C:W.413, J:V.21, A:F.285
- pi-Stacking: C:W.413
CLA.49: 22 residues within 4Å:- Chain A: F.33, S.124, M.127, G.128, W.131
- Chain C: F.252, I.253, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, R.437
- Chain H: V.12, V.16, F.23
- Ligands: CLA.5, CLA.51, BCR.56
15 PLIP interactions:8 interactions with chain C, 5 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:L.426, C:L.430, A:F.33, A:F.33, A:W.131, A:W.131, H:V.12, H:V.16
- Hydrogen bonds: C:S.261
- Salt bridges: C:R.437
- pi-Stacking: C:H.429, C:H.429, A:W.131
- Metal complexes: C:H.429
CLA.50: 18 residues within 4Å:- Chain C: L.149, L.153, L.201, I.231, C.232, G.235, W.238, H.239, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: DGD.7, CLA.45, CLA.51, BCR.56
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.153, C:L.201, C:I.231, C:W.238, C:A.248
- Hydrogen bonds: C:F.245
- pi-Stacking: C:W.238, C:H.239, C:H.239
- Metal complexes: C:H.239
CLA.51: 17 residues within 4Å:- Chain C: M.145, L.149, H.152, L.156, I.228, F.252, W.254, Y.259, Y.262, S.263, L.267
- Ligands: CLA.45, CLA.47, CLA.49, CLA.50, CLA.53, BCR.56
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:M.145, C:L.149, C:L.149, C:I.228, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:Y.262
- Salt bridges: C:H.152
CLA.52: 21 residues within 4Å:- Chain C: W.24, A.25, N.27, A.28, E.257, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Chain J: V.21
- Ligands: LHG.8, SQD.9, CLA.48, CLA.53, CLA.55, CLA.57, DGD.60
12 PLIP interactions:11 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:N.27, C:A.28, C:L.260, C:L.264, C:F.425, C:W.431, J:V.21
- Salt bridges: C:R.435
- pi-Stacking: C:W.431, C:H.432, C:H.432
- Metal complexes: C:H.432
CLA.53: 24 residues within 4Å:- Chain C: N.27, L.30, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, I.148, H.152, G.256, E.257, Y.259, L.260, S.263, L.267
- Ligands: CLA.46, CLA.47, CLA.51, CLA.52, CLA.55, CLA.57, CLA.59
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:L.37, C:A.40, C:Y.137, C:W.139, C:I.148, C:Y.259
- Hydrogen bonds: C:S.263
- pi-Stacking: C:H.44
- pi-Cation interactions: C:H.41, C:H.41
- Metal complexes: C:H.41
CLA.55: 18 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Chain J: P.20, V.21, L.24
- Ligands: LHG.8, CLA.46, CLA.47, CLA.48, CLA.52, CLA.53, CLA.57
16 PLIP interactions:14 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.47, C:I.48, C:I.48, C:I.48, C:W.51, C:W.51, C:L.267, C:F.424, C:F.425, J:P.20, J:V.21
- Hydrogen bonds: C:N.27
- pi-Stacking: C:H.44, C:H.44, C:H.44
- Metal complexes: C:H.44
CLA.57: 32 residues within 4Å:- Chain C: Q.16, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.23, L.24, A.27, F.28, W.30, Q.31
- Chain Q: I.35, N.45, L.46
- Chain T: M.19, V.20, P.24
- Ligands: CLA.52, CLA.53, BCR.54, CLA.55
17 PLIP interactions:7 interactions with chain C, 7 interactions with chain J, 2 interactions with chain Q, 1 interactions with chain T,- Hydrophobic interactions: C:L.30, C:L.30, C:V.118, C:A.121, C:I.122, J:F.23, J:L.24, J:A.27, J:F.28, Q:I.35, Q:L.46, T:V.20
- Hydrogen bonds: C:R.29
- Salt bridges: C:K.36
- pi-Stacking: J:W.30, J:W.30, J:W.30
CLA.59: 21 residues within 4Å:- Chain C: L.38, H.41, A.45, L.113, L.128, F.134, F.135, I.148, F.151, H.152, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.46, CLA.47, CLA.53, CLA.61, LMG.64, BCR.94
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:L.38, C:H.41, C:L.128, C:F.135, C:I.148, C:F.151, C:F.151, C:I.158
- pi-Stacking: C:H.152
- pi-Cation interactions: C:H.152
- Metal complexes: C:H.152
CLA.61: 14 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135, I.158
- Ligands: CLA.59, BCR.94
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:V.42, C:V.42, C:L.113, C:Y.119, C:L.128, C:F.135, C:F.135, C:I.158
- pi-Stacking: C:H.120, C:H.120, C:F.135
- Metal complexes: C:H.120
CLA.67: 28 residues within 4Å:- Chain A: F.206
- Chain D: L.45, W.48, L.122, P.149, V.152, F.153, S.155, V.156, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.1, CLA.2, CLA.3, PL9.6, PHO.65
16 PLIP interactions:15 interactions with chain D, 1 interactions with chain A,- Hydrophobic interactions: D:L.45, D:W.48, D:L.122, D:P.149, D:V.152, D:F.153, D:F.185, D:Q.186, D:V.201, D:V.204, D:L.205, A:F.206
- pi-Stacking: D:W.191, D:H.197, D:H.197
- Metal complexes: D:H.197
CLA.70: 25 residues within 4Å:- Chain D: I.35, L.36, P.39, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, H.117, F.120
- Chain G: V.39, L.42
- Chain R: G.12, L.13, G.16, A.17, L.20
- Ligands: CLA.22, DGD.74, LMT.75, BCR.80
13 PLIP interactions:9 interactions with chain D, 3 interactions with chain R, 1 interactions with chain G,- Hydrophobic interactions: D:L.36, D:P.39, D:L.43, D:W.93, D:F.120, R:L.13, R:L.13, R:L.20, G:V.39
- Hydrogen bonds: D:L.92
- pi-Stacking: D:F.113, D:H.117, D:H.117
CLA.96: 29 residues within 4Å:- Chain 7: F.17
- Chain U: F.119, Y.147, P.150, L.151, S.153, A.154, V.157, F.182, M.183, I.184, F.186, Q.187, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, I.290
- Chain X: L.182, L.205
- Ligands: CLA.97, PHO.98, CLA.99, CLA.159, LMG.160
20 PLIP interactions:16 interactions with chain U, 3 interactions with chain X, 1 interactions with chain 7,- Hydrophobic interactions: U:F.119, U:Y.147, U:P.150, U:A.154, U:F.186, U:Q.187, U:L.193, U:L.193, U:V.202, U:V.205, U:F.206, X:L.182, X:L.182, X:L.205, 7:F.17
- pi-Stacking: U:H.198, U:H.198, U:H.198, U:H.198
- Metal complexes: U:H.198
CLA.97: 22 residues within 4Å:- Chain 4: L.30
- Chain 7: F.10
- Chain U: T.45, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: M.198, V.201, A.202, G.206
- Ligands: SQD.95, CLA.96, PHO.98, LMG.105, PL9.158, CLA.159, LMG.160
7 PLIP interactions:2 interactions with chain X, 2 interactions with chain 7, 3 interactions with chain U,- Hydrophobic interactions: X:V.201, X:A.202, 7:F.10, 7:F.10, U:V.157, U:F.158, U:F.182
CLA.99: 22 residues within 4Å:- Chain U: Q.199, V.202, A.203, F.206, G.207, L.210, F.211, W.278
- Chain X: F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.96, PL9.100, DGD.154, PHO.156, CLA.159, LMG.164, PL9.176
13 PLIP interactions:7 interactions with chain U, 6 interactions with chain X,- Hydrophobic interactions: U:V.202, U:L.210, U:F.211, U:W.278, X:F.157, X:F.157, X:F.173, X:F.181, X:L.182, X:L.182
- Hydrogen bonds: U:Q.199
- pi-Stacking: U:F.206, U:F.206
CLA.101: 23 residues within 4Å:- Chain 1: V.8, Y.9, V.11, V.12, F.15
- Chain U: V.35, I.36, P.39, T.40, F.93, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Ligands: LMT.44, SQD.95, DGD.102, CLA.139, BCR.173, LMG.174
16 PLIP interactions:11 interactions with chain U, 5 interactions with chain 1,- Hydrophobic interactions: U:I.36, U:P.39, U:T.40, U:F.93, U:I.96, U:L.121, 1:V.8, 1:V.11, 1:V.12, 1:V.12, 1:F.15
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- pi-Stacking: U:H.118, U:H.118
- Metal complexes: U:H.118
CLA.114: 10 residues within 4Å:- Chain 0: F.40, I.43
- Chain V: W.185, G.186, P.187, F.190, I.207, V.208
- Ligands: CLA.115, BCR.171
10 PLIP interactions:7 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: V:W.185, V:W.185, V:W.185, V:P.187, V:F.190, V:I.207, V:V.208, 0:F.40, 0:F.40, 0:I.43
CLA.115: 25 residues within 4Å:- Chain 0: F.37, F.40, I.44, L.45, Y.48
- Chain V: E.184, G.189, F.190, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250
- Chain X: V.154, I.159, L.162
- Ligands: CLA.114, CLA.116, CLA.118, CLA.121, DGD.172
22 PLIP interactions:13 interactions with chain V, 3 interactions with chain X, 6 interactions with chain 0,- Hydrophobic interactions: V:A.200, V:H.201, V:A.205, V:V.208, V:V.208, V:F.246, V:F.247, V:F.250, V:F.250, X:V.154, X:I.159, X:L.162, 0:F.37, 0:I.44, 0:I.44, 0:L.45, 0:L.45
- pi-Stacking: V:F.190, V:H.201, V:H.201, 0:F.40
- Metal complexes: V:H.201
CLA.116: 24 residues within 4Å:- Chain 0: F.37, L.38, L.41
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.244, F.247, A.248, V.252, T.262
- Ligands: CLA.115, CLA.117, CLA.118, CLA.119, CLA.122
13 PLIP interactions:11 interactions with chain V, 2 interactions with chain 0,- Hydrophobic interactions: V:L.149, V:F.153, V:F.153, V:A.244, V:A.248, V:V.252, V:T.262, 0:F.37, 0:L.38
- Salt bridges: V:R.68
- pi-Stacking: V:H.201, V:H.202, V:H.202
CLA.117: 24 residues within 4Å:- Chain V: W.33, F.61, F.65, R.68, L.145, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.116, CLA.118, CLA.120, CLA.123, CLA.124, CLA.125, CLA.126, CLA.129, LMT.134
21 PLIP interactions:21 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.65, V:L.145, V:V.245, V:A.248, V:A.249, V:V.252, V:F.451, V:F.458, V:F.458, V:F.458, V:F.458, V:F.458, V:F.462
- Salt bridges: V:R.68
- pi-Stacking: V:F.451, V:H.455, V:H.455
- pi-Cation interactions: V:H.455
- Metal complexes: V:H.455
CLA.118: 25 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, H.100, L.103, L.143, G.147, A.205, G.209
- Ligands: BCR.92, CLA.115, CLA.116, CLA.117, CLA.119, CLA.122, CLA.123, CLA.125, CLA.129
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:T.27, V:V.30, V:A.31, V:W.33, V:A.34, V:L.69, V:L.143
- Salt bridges: V:R.68
- pi-Stacking: V:H.100, V:H.100
CLA.119: 22 residues within 4Å:- Chain V: L.69, V.71, W.91, V.96, A.99, H.100, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: SQD.14, BCR.92, CLA.116, CLA.118, CLA.131, LMT.134
17 PLIP interactions:17 interactions with chain V,- Hydrophobic interactions: V:L.69, V:V.71, V:W.91, V:W.91, V:W.91, V:V.96, V:A.99, V:L.103, V:L.103, V:L.106, V:L.149, V:F.153, V:F.156, V:F.162
- pi-Stacking: V:H.157, V:H.157
- Metal complexes: V:H.157
CLA.120: 26 residues within 4Å:- Chain 4: L.27
- Chain 5: F.14
- Chain V: W.33, M.37, Y.40, Q.58, G.59, F.61, F.325, T.327, G.328, P.329, W.450, F.451, A.454, F.458
- Chain X: F.196, T.277, M.281
- Ligands: BCR.90, BCR.91, CLA.117, CLA.126, BCR.127, LMG.130, LMG.133
16 PLIP interactions:12 interactions with chain V, 2 interactions with chain X, 1 interactions with chain 5, 1 interactions with chain 4,- Hydrophobic interactions: V:Y.40, V:F.61, V:F.325, V:T.327, V:W.450, V:W.450, V:A.454, V:F.458, X:F.196, X:T.277, 5:F.14, 4:L.27
- Hydrogen bonds: V:Y.40, V:G.328
- pi-Stacking: V:F.61, V:W.450
CLA.121: 21 residues within 4Å:- Chain 0: L.42
- Chain V: T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, G.470, L.474
- Chain X: F.120, I.123, M.126, L.127, F.130
- Ligands: CLA.115, CLA.122, CLA.123, CLA.161, SQD.162
16 PLIP interactions:7 interactions with chain X, 9 interactions with chain V,- Hydrophobic interactions: X:F.120, X:F.120, X:M.126, X:L.127, X:L.127, X:L.127, X:F.130, V:A.243, V:F.246, V:F.247, V:F.463, V:L.474
- pi-Stacking: V:H.466, V:H.466
- pi-Cation interactions: V:H.466
- Metal complexes: V:H.466
CLA.122: 26 residues within 4Å:- Chain 0: T.26, T.27, M.30, F.33, M.34, L.38, L.45
- Chain V: F.139, L.143, V.208, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229
- Chain X: F.120
- Ligands: CLA.116, CLA.118, CLA.121, CLA.123, SQD.162, BCR.171
17 PLIP interactions:11 interactions with chain V, 5 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.139, V:F.139, V:L.143, V:V.208, V:A.212, V:F.215, V:F.215, V:L.229, 0:T.26, 0:M.30, 0:F.33, 0:L.45, X:F.120
- Salt bridges: V:H.216
- pi-Stacking: V:H.216, V:H.216
- Hydrogen bonds: 0:T.26
CLA.123: 18 residues within 4Å:- Chain V: L.135, F.139, H.142, L.143, A.146, L.229, M.231, T.236, V.237, S.240, S.241
- Ligands: CLA.117, CLA.118, CLA.121, CLA.122, CLA.125, CLA.129, BCR.171
6 PLIP interactions:6 interactions with chain V,- Hydrophobic interactions: V:L.135, V:F.139, V:L.229, V:M.231, V:T.236, V:V.237
CLA.124: 21 residues within 4Å:- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: LMG.105, CLA.117, CLA.125, CLA.126, CLA.128, LMG.133
17 PLIP interactions:17 interactions with chain V,- Hydrophobic interactions: V:W.5, V:W.5, V:H.9, V:T.10, V:L.238, V:I.242, V:I.242, V:F.462, V:F.462, V:F.464
- Hydrogen bonds: V:H.9
- Salt bridges: V:H.9, V:R.472
- pi-Stacking: V:W.468, V:H.469, V:H.469
- Metal complexes: V:H.469
CLA.125: 23 residues within 4Å:- Chain V: H.9, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.117, CLA.118, CLA.123, CLA.124, CLA.126, CLA.128, CLA.129
19 PLIP interactions:19 interactions with chain V,- Hydrophobic interactions: V:H.9, V:L.12, V:L.12, V:L.19, V:A.22, V:T.27, V:V.30, V:I.234, V:I.234, V:E.235, V:V.237, V:L.238, V:L.238, V:V.245
- Hydrogen bonds: V:S.241
- pi-Stacking: V:H.26
- pi-Cation interactions: V:H.23, V:H.23, V:H.23
CLA.126: 16 residues within 4Å:- Chain V: H.9, H.26, L.29, V.30, W.33, L.461, F.462
- Ligands: BCR.90, CLA.117, CLA.120, CLA.124, CLA.125, BCR.127, CLA.128, LMG.130, LMG.133
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:L.29, V:V.30, V:V.30, V:W.33, V:W.33, V:L.461, V:F.462, V:F.462
- Salt bridges: V:H.9
- pi-Stacking: V:H.26, V:H.26, V:H.26
- pi-Cation interactions: V:H.26
- Metal complexes: V:H.26
CLA.128: 20 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: F.21
- Chain L: L.16
- Chain N: F.8
- Chain V: L.3, V.8, H.9, V.11, L.12, A.22, W.115
- Ligands: LMG.87, BCR.90, LMG.105, SQD.110, CLA.124, CLA.125, CLA.126, LMG.130
10 PLIP interactions:8 interactions with chain V, 1 interactions with chain L, 1 interactions with chain N,- Hydrophobic interactions: V:V.8, V:V.8, V:L.12, V:A.22, V:W.115, L:L.16, N:F.8
- pi-Stacking: V:H.9, V:H.9
- Metal complexes: V:H.9
CLA.129: 17 residues within 4Å:- Chain 0: L.6, L.13, N.14
- Chain V: I.20, H.23, L.24, L.133, M.138, I.141, H.142, L.145
- Ligands: BCR.92, CLA.117, CLA.118, CLA.123, CLA.125, CLA.131
10 PLIP interactions:7 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: V:I.20, V:L.133, V:I.141, V:L.145, 0:L.6, 0:L.13, 0:N.14
- pi-Stacking: V:H.142
- pi-Cation interactions: V:H.142
- Metal complexes: V:H.142
CLA.131: 15 residues within 4Å:- Chain 0: T.4, L.6, G.7
- Chain V: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: SQD.14, BCR.92, CLA.119, CLA.129
14 PLIP interactions:2 interactions with chain 0, 12 interactions with chain V,- Hydrophobic interactions: 0:L.6, V:I.20, V:L.24, V:A.110, V:W.113, V:L.120, V:L.122, V:F.123
- Hydrogen bonds: 0:T.4
- pi-Stacking: V:W.113, V:W.113, V:H.114, V:H.114
- Metal complexes: V:H.114
CLA.135: 21 residues within 4Å:- Chain W: L.83, L.156, G.159, A.160, L.163, L.173, I.212, V.221, H.225, I.228, A.266, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.136, CLA.137, CLA.140, CLA.141, BCR.152
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:L.156, W:L.163, W:I.212, W:I.228, W:A.266, W:M.270, W:I.273, W:F.277, W:V.284, W:V.284
- pi-Stacking: W:H.225, W:H.225
- pi-Cation interactions: W:H.225
- Metal complexes: W:H.225
CLA.136: 25 residues within 4Å:- Chain W: W.51, H.79, L.83, W.85, G.159, L.162, L.163, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.135, CLA.137, CLA.138, CLA.143, CLA.144, CLA.147
21 PLIP interactions:21 interactions with chain W,- Hydrophobic interactions: W:W.51, W:W.51, W:L.83, W:W.85, W:L.162, W:L.162, W:L.163, W:F.170, W:L.267, W:M.270, W:A.274, W:L.414, W:L.421, W:F.425
- Hydrogen bonds: W:Y.285
- Salt bridges: W:H.79, W:H.418
- pi-Stacking: W:H.418, W:H.418
- pi-Cation interactions: W:H.418
- Metal complexes: W:H.418
CLA.137: 21 residues within 4Å:- Chain W: I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, W.85, V.102, H.106, L.162, L.267, M.270
- Ligands: CLA.135, CLA.136, CLA.141, CLA.143, CLA.144, CLA.147, LMG.155
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:I.48, W:V.49, W:A.52, W:W.85, W:V.102, W:L.162, W:L.267
- Salt bridges: W:H.79
- pi-Stacking: W:H.106, W:H.106, W:H.106
- Metal complexes: W:H.106
CLA.138: 20 residues within 4Å:- Chain 3: P.17, V.18, V.21
- Chain U: F.285
- Chain W: W.51, M.55, F.58, Q.72, G.73, I.75, L.392, W.413, S.417
- Ligands: LHG.104, CLA.136, CLA.142, CLA.144, DGD.151, LMG.153, DGD.154
8 PLIP interactions:1 interactions with chain U, 6 interactions with chain W, 1 interactions with chain 3,- Hydrophobic interactions: U:F.285, W:W.51, W:I.75, W:I.75, W:L.392, W:W.413, 3:V.21
- pi-Stacking: W:W.413
CLA.139: 22 residues within 4Å:- Chain 1: V.12, V.16, F.23
- Chain U: F.33, S.124, M.127, G.128, W.131
- Chain W: F.252, I.253, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, R.437
- Ligands: CLA.101, CLA.141, BCR.152
15 PLIP interactions:8 interactions with chain W, 2 interactions with chain 1, 5 interactions with chain U,- Hydrophobic interactions: W:Y.262, W:L.426, W:L.430, 1:V.12, 1:V.16, U:F.33, U:F.33, U:W.131, U:W.131
- Hydrogen bonds: W:S.261
- Salt bridges: W:R.437
- pi-Stacking: W:H.429, W:H.429, U:W.131
- Metal complexes: W:H.429
CLA.140: 18 residues within 4Å:- Chain W: L.149, L.153, L.201, I.231, C.232, G.235, W.238, H.239, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: DGD.102, CLA.135, CLA.141, BCR.152
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.149, W:L.149, W:L.153, W:L.201, W:I.231, W:W.238
- Hydrogen bonds: W:F.245
- pi-Stacking: W:W.238, W:H.239, W:H.239
- Metal complexes: W:H.239
CLA.141: 18 residues within 4Å:- Chain W: M.145, T.146, L.149, H.152, L.156, I.228, F.252, W.254, Y.259, Y.262, S.263, L.267
- Ligands: CLA.135, CLA.137, CLA.139, CLA.140, CLA.143, BCR.152
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:M.145, W:L.149, W:L.149, W:I.228, W:F.252, W:W.254, W:Y.259, W:Y.259, W:Y.262, W:Y.262, W:Y.262
- Hydrogen bonds: W:H.152
- Salt bridges: W:H.152
CLA.142: 21 residues within 4Å:- Chain 3: V.21
- Chain W: W.24, A.25, N.27, A.28, E.257, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Ligands: SQD.103, LHG.104, CLA.138, CLA.143, CLA.144, CLA.145, DGD.151
13 PLIP interactions:12 interactions with chain W, 1 interactions with chain 3,- Hydrophobic interactions: W:N.27, W:A.28, W:L.260, W:L.264, W:F.425, W:W.431, 3:V.21
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431, W:H.432, W:H.432
- Metal complexes: W:H.432
CLA.143: 25 residues within 4Å:- Chain W: N.27, L.30, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.267
- Ligands: CLA.136, CLA.137, CLA.141, CLA.142, CLA.144, CLA.145, CLA.147
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.30, W:L.37, W:A.40, W:Y.137, W:W.139, W:I.148, W:L.156, W:Y.259
- Hydrogen bonds: W:S.263
- pi-Stacking: W:H.44
- pi-Cation interactions: W:H.41, W:H.41
- Metal complexes: W:H.41
CLA.144: 18 residues within 4Å:- Chain 3: P.20, V.21, L.24
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Ligands: LHG.104, CLA.136, CLA.137, CLA.138, CLA.142, CLA.143, CLA.145
15 PLIP interactions:13 interactions with chain W, 2 interactions with chain 3,- Hydrophobic interactions: W:L.47, W:I.48, W:I.48, W:I.48, W:W.51, W:L.267, W:F.424, W:F.425, 3:P.20, 3:V.21
- Hydrogen bonds: W:N.27
- pi-Stacking: W:H.44, W:H.44, W:H.44
- Metal complexes: W:H.44
CLA.145: 32 residues within 4Å:- Chain 3: F.23, L.24, A.27, F.28, W.30, Q.31
- Chain W: Q.16, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, A.111, G.114, F.115, V.118, A.121, I.122
- Ligands: CLA.142, CLA.143, CLA.144, BCR.146
- Chain a: I.35, N.45, L.46
- Chain d: M.19, V.20, P.24
17 PLIP interactions:7 interactions with chain W, 7 interactions with chain 3, 2 interactions with chain a, 1 interactions with chain d,- Hydrophobic interactions: W:L.30, W:L.30, W:A.40, W:V.118, W:I.122, 3:F.23, 3:L.24, 3:A.27, 3:F.28, a:I.35, a:L.46, d:V.20
- Hydrogen bonds: W:R.29
- Salt bridges: W:K.36
- pi-Stacking: 3:W.30, 3:W.30, 3:W.30
CLA.147: 21 residues within 4Å:- Chain W: L.38, H.41, A.45, L.113, L.128, F.134, F.135, I.148, F.151, H.152, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.136, CLA.137, CLA.143, BCR.148, CLA.149, LMG.155
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:L.38, W:H.41, W:L.128, W:F.135, W:I.148, W:I.148, W:F.151, W:F.151, W:I.158
- pi-Stacking: W:H.152
- pi-Cation interactions: W:H.152
- Metal complexes: W:H.152
CLA.149: 14 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135, I.158
- Ligands: CLA.147, BCR.148
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:V.42, W:V.42, W:L.113, W:Y.119, W:L.128, W:F.135, W:F.135, W:I.158
- Salt bridges: W:H.120
- pi-Stacking: W:H.120, W:H.120, W:F.135
- Metal complexes: W:H.120
CLA.159: 29 residues within 4Å:- Chain U: F.206
- Chain X: L.45, W.48, L.122, P.149, V.152, F.153, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.96, CLA.97, CLA.99, PL9.100, PHO.156
19 PLIP interactions:18 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:L.45, X:W.48, X:L.122, X:P.149, X:V.152, X:F.153, X:F.181, X:L.182, X:F.185, X:Q.186, X:V.201, X:V.201, X:V.204, X:L.205, U:F.206
- pi-Stacking: X:W.191, X:H.197, X:H.197
- Metal complexes: X:H.197
CLA.161: 25 residues within 4Å:- Chain 0: V.39, L.42
- Chain X: I.35, L.36, P.39, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, H.117, F.120
- Ligands: CLA.121, DGD.163, LMT.165, BCR.171
- Chain b: G.12, L.13, G.16, A.17, L.20
12 PLIP interactions:8 interactions with chain X, 1 interactions with chain 0, 3 interactions with chain b,- Hydrophobic interactions: X:L.36, X:P.39, X:L.43, X:F.120, 0:V.39, b:L.13, b:L.13, b:L.20
- Hydrogen bonds: X:L.92
- pi-Stacking: X:F.113, X:H.117, X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.4: 28 residues within 4Å:- Chain A: L.41, A.44, T.45, I.115, F.119, Y.126, Q.130, A.146, Y.147, A.149, P.150, M.172, L.174, G.175, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.1, CLA.2, SQD.14, PL9.66
15 PLIP interactions:13 interactions with chain A, 2 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:I.115, A:A.146, A:Y.147, A:Y.147, A:A.149, A:P.150, A:L.174, A:P.279, A:V.283, D:L.205, D:A.212
- Hydrogen bonds: A:Q.130, A:Y.147
PHO.65: 31 residues within 4Å:- Chain A: F.206, A.209, L.210, M.214, L.258, I.259
- Chain D: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, P.275, V.276, L.279
- Ligands: CLA.3, PL9.6, CLA.67
23 PLIP interactions:22 interactions with chain D, 1 interactions with chain A- Hydrophobic interactions: D:A.41, D:A.44, D:W.48, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:F.125, D:F.125, D:A.145, D:F.146, D:A.148, D:P.149, D:F.153, D:F.173, D:P.275, D:L.279, D:L.279, A:F.206
- Hydrogen bonds: D:N.142
- pi-Stacking: D:F.146
PHO.98: 29 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, A.149, P.150, M.172, L.174, G.175, P.279, V.280, V.283
- Chain X: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: SQD.95, CLA.96, CLA.97, PL9.158
18 PLIP interactions:16 interactions with chain U, 2 interactions with chain X- Hydrophobic interactions: U:L.41, U:A.44, U:F.48, U:F.48, U:I.115, U:F.119, U:A.146, U:Y.147, U:Y.147, U:A.149, U:P.150, U:L.174, U:P.279, U:V.283, X:L.205, X:A.212
- Hydrogen bonds: U:Y.126, U:Q.130
PHO.156: 31 residues within 4Å:- Chain U: F.206, A.209, L.210, A.213, M.214, L.258, I.259
- Chain X: L.37, A.41, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, P.275, V.276, L.279
- Ligands: CLA.99, PL9.100, CLA.159
23 PLIP interactions:20 interactions with chain X, 3 interactions with chain U- Hydrophobic interactions: X:A.41, X:W.48, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:F.125, X:F.125, X:A.145, X:F.146, X:A.148, X:P.149, X:F.153, X:F.173, X:P.275, X:L.279, X:L.279, U:F.206, U:A.209, U:A.213
- Hydrogen bonds: X:N.142
- pi-Stacking: X:F.146
- 6 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.6: 23 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, A.251, H.252, F.255, I.259, S.264, F.265, L.271, F.274
- Chain D: V.30, F.38, A.41, Y.42, L.45
- Chain F: A.21, T.24
- Ligands: CLA.3, PHO.65, CLA.67, PL9.84
21 PLIP interactions:14 interactions with chain A, 5 interactions with chain D, 2 interactions with chain F- Hydrophobic interactions: A:F.211, A:F.211, A:M.214, A:L.218, A:L.218, A:H.252, A:F.255, A:F.255, A:F.255, A:I.259, A:L.271, A:L.271, A:F.274, D:V.30, D:F.38, D:F.38, D:Y.42, D:L.45, F:A.21, F:T.24
- Hydrogen bonds: A:F.265
PL9.66: 34 residues within 4Å:- Chain A: F.52, I.53, I.77
- Chain D: M.199, A.202, G.203, L.209, L.210, I.213, H.214, T.217, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.273, V.274, T.277, G.278
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain N: F.10
- Ligands: CLA.2, PHO.4, LMG.10, LMG.69
29 PLIP interactions:14 interactions with chain D, 6 interactions with chain K, 6 interactions with chain A, 3 interactions with chain N- Hydrophobic interactions: D:M.199, D:A.202, D:L.209, D:I.213, D:W.253, D:F.257, D:F.261, D:F.261, D:L.267, D:F.273, D:V.274, D:T.277, K:L.23, K:V.26, K:L.27, K:L.29, K:L.30, K:L.30, A:F.52, A:F.52, A:F.52, A:I.53, A:I.77, A:I.77, N:F.10, N:F.10, N:F.10
- Hydrogen bonds: D:T.217, D:F.261
PL9.84: 9 residues within 4Å:- Chain F: L.33
- Chain I: V.15, G.19
- Ligands: CLA.3, PL9.6, SQD.9, LMG.68, BCR.71, LMG.78
1 PLIP interactions:1 interactions with chain F- Hydrophobic interactions: F:L.33
PL9.100: 24 residues within 4Å:- Chain U: F.211, M.214, H.215, L.218, A.251, H.252, F.255, I.259, S.264, F.265, L.271, F.274
- Chain X: V.30, F.38, A.41, Y.42, L.45
- Chain Z: A.21, T.24
- Ligands: CLA.99, PHO.156, CLA.159, LMG.168, PL9.176
19 PLIP interactions:12 interactions with chain U, 5 interactions with chain X, 2 interactions with chain Z- Hydrophobic interactions: U:F.211, U:M.214, U:L.218, U:H.252, U:F.255, U:F.255, U:F.255, U:I.259, U:L.271, U:L.271, U:F.274, X:V.30, X:F.38, X:F.38, X:Y.42, X:L.45, Z:A.21, Z:T.24
- Hydrogen bonds: U:F.265
PL9.158: 33 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29, L.30
- Chain 7: F.10
- Chain U: F.52, I.53, I.77
- Chain X: M.199, A.202, G.203, L.209, L.210, I.213, H.214, T.217, M.246, A.249, N.250, W.253, I.259, A.260, F.261, L.267, F.273, V.274, T.277, G.278
- Ligands: CLA.97, PHO.98, LMG.105, LMG.160
29 PLIP interactions:15 interactions with chain X, 5 interactions with chain U, 6 interactions with chain 4, 3 interactions with chain 7- Hydrophobic interactions: X:M.199, X:A.202, X:L.209, X:I.213, X:W.253, X:F.261, X:F.261, X:F.261, X:L.267, X:F.273, X:V.274, X:T.277, U:F.52, U:F.52, U:F.52, U:I.53, U:I.77, 4:L.23, 4:V.26, 4:L.27, 4:L.29, 4:L.30, 4:L.30, 7:F.10, 7:F.10, 7:F.10
- Hydrogen bonds: X:H.214, X:F.261
- pi-Stacking: X:F.261
PL9.176: 8 residues within 4Å:- Chain 2: V.15, G.19
- Chain Z: L.33
- Ligands: CLA.99, PL9.100, SQD.103, LMG.164, LMG.168
1 PLIP interactions:1 interactions with chain Z- Hydrophobic interactions: Z:L.33
- 14 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.7: 20 residues within 4Å:- Chain A: F.93, P.95, W.97, E.98, L.121, F.155
- Chain C: L.202, K.203, S.204, P.205, F.206, W.211, M.269, F.272
- Chain H: K.5, Y.9
- Chain M: G.12
- Ligands: CLA.5, CLA.50, DGD.58
11 PLIP interactions:6 interactions with chain C, 3 interactions with chain H, 2 interactions with chain A- Hydrophobic interactions: C:F.206, C:W.211, C:W.211, C:W.211, C:F.272, A:F.155
- Hydrogen bonds: C:S.204, H:K.5, H:K.5, H:Y.9, A:E.98
DGD.35: 19 residues within 4Å:- Chain B: Y.193, F.250, V.251, G.254, Y.258, Y.273, S.277, F.463
- Chain D: H.87, L.116, L.162, S.165, L.291
- Chain G: Y.48, N.49, V.59, S.60, W.61
- Ligands: CLA.16
16 PLIP interactions:4 interactions with chain G, 7 interactions with chain B, 5 interactions with chain D- Hydrophobic interactions: G:Y.48, B:Y.258, B:F.463, B:F.463, D:L.116, D:L.291
- Hydrogen bonds: G:V.59, G:S.60, G:W.61, B:Y.193, B:Y.258, B:S.277, B:S.277, D:H.87, D:H.87, D:S.165
DGD.42: 14 residues within 4Å:- Chain B: W.75, D.87, G.89, F.90, W.91, L.98, V.102
- Chain U: I.46, I.50
- Ligands: BCR.33, LMT.39, LMT.44, BCR.173, LMG.174
9 PLIP interactions:7 interactions with chain B, 2 interactions with chain U- Hydrophobic interactions: B:W.75, B:F.90, B:W.91, B:L.98, B:V.102, U:I.46, U:I.50
- Hydrogen bonds: B:W.75, B:G.89
DGD.58: 23 residues within 4Å:- Chain A: L.151, F.155, I.163
- Chain C: P.205, F.206, G.207, G.208, G.210, V.213, S.214, F.272, I.273, C.276, F.280, N.282, T.293, P.295, D.348, F.349, R.350, F.423, L.426
- Ligands: DGD.7
15 PLIP interactions:11 interactions with chain C, 4 interactions with chain A- Hydrophobic interactions: C:F.206, C:F.272, C:F.272, C:F.272, C:F.423, C:L.426, A:L.151, A:F.155, A:F.155, A:I.163
- Hydrogen bonds: C:G.208, C:V.213, C:N.282, C:R.350, C:R.350
DGD.60: 23 residues within 4Å:- Chain A: F.197, T.292, L.297
- Chain C: Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Chain I: Y.32
- Ligands: SQD.9, LHG.11, CLA.48, CLA.52, DGD.62, LMG.63, BCR.85
13 PLIP interactions:3 interactions with chain A, 8 interactions with chain C, 2 interactions with chain I- Hydrophobic interactions: A:F.197, A:F.197, A:L.297, C:L.392
- Hydrogen bonds: C:E.71, C:G.73, C:S.394, C:N.406, C:N.406, C:V.408, C:W.413, I:Y.32, I:Y.32
DGD.62: 32 residues within 4Å:- Chain A: P.196, Q.199, L.200, A.203, W.278, V.281, G.282, F.300, N.301, F.302, S.305
- Chain C: L.392, N.393, S.394, V.395, N.403, S.404, N.406
- Chain I: F.28, A.31, Y.32, G.36, S.37, S.38, L.39
- Chain P: Q.34
- Ligands: CLA.3, SQD.9, CLA.48, DGD.60, LMG.68, BCR.85
14 PLIP interactions:7 interactions with chain A, 4 interactions with chain C, 1 interactions with chain P, 2 interactions with chain I- Hydrophobic interactions: A:L.200, A:A.203, A:W.278, A:W.278, A:V.281, A:F.300
- Hydrogen bonds: A:S.305, C:N.393, C:N.403, C:S.404, C:S.404, P:Q.34, I:G.36, I:S.38
DGD.74: 11 residues within 4Å:- Chain D: Y.42, D.100, F.101, T.102
- Chain E: L.41, D.44, V.45, F.46
- Ligands: CLA.70, BCR.71, LMT.75
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain E- Hydrophobic interactions: D:Y.42, D:F.101, E:F.46
- Hydrogen bonds: D:D.100
DGD.102: 20 residues within 4Å:- Chain 1: K.5, Y.9
- Chain 6: G.12
- Chain U: F.93, P.95, W.97, E.98, L.121, F.155
- Chain W: L.202, K.203, S.204, P.205, F.206, W.211, M.269, F.272
- Ligands: CLA.101, CLA.140, DGD.150
11 PLIP interactions:6 interactions with chain W, 3 interactions with chain 1, 2 interactions with chain U- Hydrophobic interactions: W:F.206, W:F.206, W:W.211, W:W.211, W:F.272, U:F.155
- Hydrogen bonds: W:S.204, 1:K.5, 1:K.5, 1:Y.9, U:E.98
DGD.111: 14 residues within 4Å:- Chain A: I.46
- Chain V: W.75, D.87, G.89, F.90, W.91, L.98, V.102
- Ligands: BCR.81, LMG.82, BCR.92, LMT.113, BCR.127, LMT.134
7 PLIP interactions:6 interactions with chain V, 1 interactions with chain A- Hydrophobic interactions: V:W.75, V:F.90, V:W.91, V:V.102, A:I.46
- Hydrogen bonds: V:W.75, V:G.89
DGD.150: 24 residues within 4Å:- Chain U: L.151, F.155, L.159, I.163
- Chain W: P.205, F.206, G.207, G.208, G.210, V.213, S.214, F.272, I.273, C.276, F.280, N.282, T.293, P.295, D.348, F.349, R.350, F.423, L.426
- Ligands: DGD.102
16 PLIP interactions:11 interactions with chain W, 5 interactions with chain U- Hydrophobic interactions: W:F.206, W:F.272, W:F.272, W:F.272, W:F.423, W:L.426, U:L.151, U:F.155, U:F.155, U:L.159, U:I.163
- Hydrogen bonds: W:G.208, W:V.213, W:N.282, W:R.350, W:R.350
DGD.151: 23 residues within 4Å:- Chain 2: Y.32
- Chain U: F.197, T.292, L.297
- Chain W: Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Ligands: SQD.103, LHG.106, CLA.138, CLA.142, LMG.153, DGD.154, BCR.177
14 PLIP interactions:3 interactions with chain U, 9 interactions with chain W, 2 interactions with chain 2- Hydrophobic interactions: U:F.197, U:F.197, U:L.297, W:L.392, W:W.413
- Hydrogen bonds: W:E.71, W:G.73, W:S.394, W:N.406, W:N.406, W:V.408, W:W.413, 2:Y.32, 2:Y.32
DGD.154: 30 residues within 4Å:- Chain 2: F.28, A.31, Y.32, G.36, S.37, S.38, L.39
- Chain 9: Q.34
- Chain U: P.196, Q.199, L.200, W.278, G.282, F.300, N.301, F.302, S.305
- Chain W: L.392, N.393, S.394, V.395, N.403, S.404, N.406
- Ligands: CLA.99, SQD.103, CLA.138, DGD.151, LMG.164, BCR.177
12 PLIP interactions:3 interactions with chain 2, 4 interactions with chain W, 4 interactions with chain U, 1 interactions with chain 9- Hydrophobic interactions: 2:F.28, U:W.278, U:W.278, U:F.300
- Hydrogen bonds: 2:G.36, 2:S.38, W:N.393, W:N.403, W:S.404, W:S.404, U:S.305, 9:Q.34
DGD.163: 9 residues within 4Å:- Chain X: D.100, F.101, T.102
- Chain Y: L.41, D.44, V.45
- Ligands: CLA.161, LMT.165, BCR.169
2 PLIP interactions:2 interactions with chain X- Hydrophobic interactions: X:F.101
- Hydrogen bonds: X:D.100
DGD.172: 18 residues within 4Å:- Chain 0: Y.48, N.49, V.59, S.60, W.61
- Chain V: Y.193, F.250, V.251, G.254, Y.258, Y.273, S.277, F.463
- Chain X: H.87, L.116, L.162, S.165
- Ligands: CLA.115
14 PLIP interactions:4 interactions with chain 0, 4 interactions with chain X, 6 interactions with chain V- Hydrophobic interactions: 0:Y.48, X:L.116, V:F.463, V:F.463
- Hydrogen bonds: 0:V.59, 0:S.60, 0:W.61, X:H.87, X:H.87, X:S.165, V:Y.193, V:Y.193, V:S.277, V:S.277
- 4 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.8: 20 residues within 4Å:- Chain A: R.140, W.142, V.145, F.273, V.281, W.284
- Chain C: W.24, F.424, W.431, R.435
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.9, CLA.48, CLA.52, CLA.55
11 PLIP interactions:4 interactions with chain A, 3 interactions with chain D, 4 interactions with chain C- Hydrophobic interactions: A:V.145, A:V.281, A:W.284, C:W.24, C:W.24, C:F.424, C:F.424
- Salt bridges: A:R.140
- Hydrogen bonds: D:N.220, D:A.229, D:T.231
LHG.11: 9 residues within 4Å:- Chain A: Y.262, S.264, N.266
- Chain C: W.23
- Chain J: F.36
- Ligands: SQD.9, DGD.60, LMG.78, BCR.85
4 PLIP interactions:2 interactions with chain A, 1 interactions with chain J, 1 interactions with chain C- Hydrogen bonds: A:S.264, A:N.266
- Hydrophobic interactions: J:F.36, C:W.23
LHG.104: 19 residues within 4Å:- Chain U: R.140, W.142, V.145, F.273, V.281
- Chain W: W.24, F.424, W.431, R.435
- Chain X: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.103, CLA.138, CLA.142, CLA.144
11 PLIP interactions:3 interactions with chain X, 4 interactions with chain U, 4 interactions with chain W- Hydrogen bonds: X:N.220, X:A.229, X:T.231
- Hydrophobic interactions: U:V.145, U:F.273, U:V.281, W:W.24, W:W.24, W:F.424, W:F.424
- Salt bridges: U:R.140
LHG.106: 10 residues within 4Å:- Chain 3: F.36
- Chain U: Y.262, S.264, N.266
- Chain W: W.23
- Ligands: SQD.103, DGD.151, LMG.168, BCR.177, BCR.178
4 PLIP interactions:2 interactions with chain U, 1 interactions with chain 3, 1 interactions with chain W- Hydrogen bonds: U:S.264, U:N.266
- Hydrophobic interactions: 3:F.36, W:W.23
- 10 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.9: 18 residues within 4Å:- Chain A: N.267, S.270, F.273, F.274, W.278
- Chain C: A.22, W.24
- Chain D: F.232, R.233
- Chain J: L.24, F.28
- Ligands: LHG.8, LHG.11, CLA.52, DGD.60, DGD.62, PL9.84, BCR.85
9 PLIP interactions:4 interactions with chain A, 4 interactions with chain J, 1 interactions with chain D- Hydrophobic interactions: A:F.274, A:F.274, J:L.24, J:F.28, J:F.28, J:F.28
- Hydrogen bonds: A:N.267, A:S.270
- Salt bridges: D:R.233
SQD.14: 21 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, I.38, L.41, L.42, T.45
- Chain H: F.15
- Chain N: F.22
- Chain V: L.109, W.113, Y.117
- Ligands: PHO.4, CLA.5, BCR.81, BCR.91, BCR.92, CLA.119, CLA.131
11 PLIP interactions:8 interactions with chain A, 2 interactions with chain V, 1 interactions with chain H- Hydrophobic interactions: A:L.28, A:V.30, A:I.38, A:I.38, A:L.42, A:T.45, V:L.109, H:F.15
- Hydrogen bonds: A:W.20, A:L.28, V:W.113
SQD.38: 12 residues within 4Å:- Chain B: K.227, A.228, L.229, R.230, L.474
- Chain D: K.23, W.32, R.134, L.135
- Chain R: F.24
- Ligands: CLA.22, LMT.40
11 PLIP interactions:4 interactions with chain B, 6 interactions with chain D, 1 interactions with chain R- Hydrophobic interactions: B:L.229, D:W.32, D:W.32, R:F.24
- Salt bridges: B:R.230, B:R.230, B:R.230, D:K.23, D:K.23
- Hydrogen bonds: D:K.23, D:K.23
SQD.41: 14 residues within 4Å:- Chain 4: R.14, Y.18
- Chain 5: Y.26
- Chain 7: F.19, F.23
- Chain B: R.18, L.29, S.104, F.108, W.115
- Chain K: N.4
- Ligands: CLA.28, BCR.31, LMG.180
11 PLIP interactions:1 interactions with chain K, 4 interactions with chain 4, 3 interactions with chain 7, 3 interactions with chain B- Hydrogen bonds: K:N.4, 4:R.14, 4:R.14
- Hydrophobic interactions: 4:Y.18, 7:F.19, 7:F.19, 7:F.19, B:L.29, B:F.108
- Salt bridges: 4:R.14, B:R.18
SQD.79: 12 residues within 4Å:- Chain D: W.21, R.24, R.26
- Chain E: E.6
- Chain F: F.15, T.16, V.17, W.19
- Chain R: L.22, T.23, V.26, I.30
8 PLIP interactions:4 interactions with chain F, 2 interactions with chain D, 2 interactions with chain R- Hydrophobic interactions: F:F.15, F:W.19, R:L.22, R:V.26
- Hydrogen bonds: F:T.16, F:V.17, D:R.24
- Salt bridges: D:R.26
SQD.95: 21 residues within 4Å:- Chain 7: F.22
- Chain B: W.113, Y.117
- Chain U: W.20, N.26, R.27, L.28, V.30, I.38, L.41, L.42, T.45
- Ligands: CLA.20, CLA.30, BCR.32, BCR.34, CLA.97, PHO.98, CLA.101, BCR.173, LMG.174
10 PLIP interactions:10 interactions with chain U- Hydrophobic interactions: U:L.28, U:V.30, U:I.38, U:I.38, U:I.38, U:L.41, U:L.42, U:T.45
- Hydrogen bonds: U:W.20, U:L.28
SQD.103: 19 residues within 4Å:- Chain 3: L.24, F.28
- Chain U: N.267, S.270, F.273, F.274, W.278
- Chain W: A.22, W.23, W.24
- Chain X: F.232, R.233
- Ligands: LHG.104, LHG.106, CLA.142, DGD.151, DGD.154, PL9.176, BCR.177
10 PLIP interactions:4 interactions with chain 3, 1 interactions with chain X, 5 interactions with chain U- Hydrophobic interactions: 3:L.24, 3:F.28, 3:F.28, 3:F.28, U:F.274, U:F.274, U:W.278
- Salt bridges: X:R.233
- Hydrogen bonds: U:N.267, U:S.270
SQD.110: 15 residues within 4Å:- Chain 4: N.4
- Chain K: R.14, Y.18
- Chain L: Y.26
- Chain N: F.19, F.23
- Chain V: R.18, A.28, L.29, S.104, F.108, W.115
- Ligands: LMG.87, BCR.90, CLA.128
12 PLIP interactions:4 interactions with chain K, 3 interactions with chain V, 1 interactions with chain L, 3 interactions with chain N, 1 interactions with chain 4- Hydrophobic interactions: K:Y.18, V:A.28, V:F.108, N:F.19, N:F.19, N:F.19
- Hydrogen bonds: K:R.14, K:R.14, L:Y.26, 4:N.4
- Salt bridges: K:R.14, V:R.18
SQD.162: 13 residues within 4Å:- Chain V: K.227, A.228, L.229, R.230, L.474
- Chain X: K.23, W.32, R.134, L.135
- Ligands: CLA.121, CLA.122, LMT.132
- Chain b: F.24
11 PLIP interactions:6 interactions with chain X, 1 interactions with chain b, 4 interactions with chain V- Hydrophobic interactions: X:W.32, X:W.32, b:F.24, V:L.229
- Hydrogen bonds: X:K.23, X:K.23
- Salt bridges: X:K.23, X:K.23, V:R.230, V:R.230, V:R.230
SQD.170: 12 residues within 4Å:- Chain X: W.21, R.24, R.26
- Chain Y: E.6
- Chain Z: F.15, T.16, V.17, W.19
- Chain b: L.22, T.23, V.26, I.30
8 PLIP interactions:1 interactions with chain Y, 3 interactions with chain Z, 2 interactions with chain X, 2 interactions with chain b- Hydrogen bonds: Y:E.6, Z:V.17, X:R.24
- Hydrophobic interactions: Z:F.15, Z:W.19, b:L.22, b:V.26
- Salt bridges: X:R.26
- 22 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.10: 27 residues within 4Å:- Chain A: S.232, N.234, Y.235
- Chain B: W.5, Y.6
- Chain D: W.266, F.269, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, I.24, V.26
- Chain L: F.21, L.22
- Ligands: CLA.2, CLA.25, CLA.28, LMG.36, LMG.37, PL9.66, LMG.69
Ligand excluded by PLIPLMG.36: 18 residues within 4Å:- Chain A: N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain D: R.139, Y.141, F.269, F.273, T.277
- Chain K: L.23
- Ligands: LMG.10, CLA.21, CLA.25, CLA.27
Ligand excluded by PLIPLMG.37: 19 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, F.453, A.454, V.457, L.461
- Chain D: I.284
- Chain K: F.35
- Chain L: L.6, A.10
- Ligands: LMG.10, CLA.21, CLA.27, CLA.28, BCR.31, LMT.88
Ligand excluded by PLIPLMG.63: 9 residues within 4Å:- Chain C: F.58, H.62
- Chain J: D.14, V.18, V.21
- Chain Q: I.25
- Ligands: CLA.48, DGD.60, BCR.85
Ligand excluded by PLIPLMG.64: 13 residues within 4Å:- Chain C: W.85, D.95, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Chain T: F.59
- Ligands: CLA.47, CLA.59, BCR.94
Ligand excluded by PLIPLMG.68: 17 residues within 4Å:- Chain D: Y.67, G.70, C.71, N.72, F.73
- Chain F: T.29, I.36, M.39, Q.40
- Chain I: F.27, G.30, A.31, G.36
- Ligands: CLA.3, DGD.62, BCR.71, PL9.84
Ligand excluded by PLIPLMG.69: 22 residues within 4Å:- Chain D: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: T.15, Y.18, L.19, L.29
- Chain N: F.10, I.13, F.17, A.20
- Ligands: CLA.1, CLA.2, LMG.10, PL9.66, BCR.91
Ligand excluded by PLIPLMG.76: 13 residues within 4Å:- Chain A: A.54, L.72, Y.73, L.102, D.103, L.106
- Chain D: R.304
- Chain M: G.112
- Chain V: A.43, W.75, S.76, W.78, L.98
Ligand excluded by PLIPLMG.78: 10 residues within 4Å:- Chain A: Y.262, A.263
- Chain D: F.27, V.28
- Chain E: P.8, F.9, S.10
- Chain F: R.18
- Ligands: LHG.11, PL9.84
Ligand excluded by PLIPLMG.82: 8 residues within 4Å:- Chain H: M.1, T.3, L.4, T.7
- Ligands: CLA.5, LMT.83, DGD.111, LMT.113
Ligand excluded by PLIPLMG.87: 14 residues within 4Å:- Chain 4: P.9, V.10
- Chain 5: F.21, I.24, L.25, Q.28, Q.32
- Chain L: I.23, V.27, E.30, S.31, Q.33
- Ligands: SQD.110, CLA.128
Ligand excluded by PLIPLMG.105: 27 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, I.24, V.26
- Chain 5: F.21, L.22
- Chain U: S.232, N.234, Y.235
- Chain V: W.5, Y.6
- Chain X: W.266, F.269, F.270, F.273
- Ligands: CLA.97, CLA.124, CLA.128, LMG.130, LMG.133, PL9.158, LMG.160
Ligand excluded by PLIPLMG.130: 20 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, A.10
- Chain V: Y.40, T.327, G.328, P.329, K.332, F.453, A.454, V.457, L.461
- Chain X: I.284
- Ligands: BCR.90, LMG.105, CLA.120, CLA.126, CLA.128, LMT.179
Ligand excluded by PLIPLMG.133: 19 residues within 4Å:- Chain 5: F.14
- Chain U: N.234
- Chain V: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain X: R.139, Y.141, I.144, F.269, F.273, T.277
- Ligands: LMG.105, CLA.120, CLA.124, CLA.126
Ligand excluded by PLIPLMG.153: 9 residues within 4Å:- Chain 3: D.14, V.18, V.21
- Chain W: F.58, H.62
- Ligands: CLA.138, DGD.151, BCR.177
- Chain a: I.25
Ligand excluded by PLIPLMG.155: 13 residues within 4Å:- Chain W: W.85, D.95, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Ligands: CLA.137, CLA.147, BCR.148
- Chain d: F.59
Ligand excluded by PLIPLMG.157: 12 residues within 4Å:- Chain 6: G.112
- Chain B: A.43, W.75, S.76, W.78, L.98
- Chain U: L.72, Y.73, L.102, D.103, L.106
- Chain X: R.304
Ligand excluded by PLIPLMG.160: 23 residues within 4Å:- Chain 4: T.15, Y.18, L.19, L.22, L.29
- Chain 7: F.10, I.13, F.17, A.20
- Chain X: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: BCR.32, CLA.96, CLA.97, LMG.105, PL9.158
Ligand excluded by PLIPLMG.164: 17 residues within 4Å:- Chain 2: F.27, G.30, A.31, G.36
- Chain X: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain Z: I.36, M.39, Q.40
- Ligands: CLA.99, DGD.154, BCR.169, PL9.176
Ligand excluded by PLIPLMG.168: 10 residues within 4Å:- Chain U: Y.262, A.263
- Chain X: F.27, V.28
- Chain Y: P.8, F.9, S.10
- Ligands: PL9.100, LHG.106, PL9.176
Ligand excluded by PLIPLMG.174: 9 residues within 4Å:- Chain 1: M.1, T.3, L.4, T.7
- Ligands: DGD.42, LMT.44, SQD.95, CLA.101, LMT.175
Ligand excluded by PLIPLMG.180: 14 residues within 4Å:- Chain 5: I.23, V.27, E.30, S.31, Q.33
- Chain K: P.9, V.10
- Chain L: F.21, I.24, L.25, Q.28, Q.32
- Ligands: CLA.28, SQD.41
Ligand excluded by PLIP- 2 x OEC: OXYGEN EVOLVING SYSTEM(Non-covalent)
OEC.12: 8 residues within 4Å:- Chain A: D.170, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342
10 PLIP interactions:1 interactions with chain C, 9 interactions with chain A- Metal complexes: C:E.342, A:D.170, A:E.189, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342
OEC.107: 9 residues within 4Å:- Chain U: D.170, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.342, R.345
9 PLIP interactions:9 interactions with chain U- Metal complexes: U:D.170, U:E.189, U:E.189, U:H.332, U:E.333, U:E.333, U:E.333, U:D.342, U:D.342
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.13: 5 residues within 4Å:- Chain A: H.215, H.272
- Chain D: H.214, H.268
- Ligands: BCT.72
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain D- Metal complexes: A:H.215, A:H.272, D:H.214, D:H.268
FE2.108: 5 residues within 4Å:- Chain U: H.215, H.272
- Chain X: H.214, H.268
- Ligands: BCT.166
4 PLIP interactions:2 interactions with chain X, 2 interactions with chain U- Metal complexes: X:H.214, X:H.268, U:H.215, U:H.272
- 24 x BCR: BETA-CAROTENE(Non-covalent)
BCR.31: 18 residues within 4Å:- Chain 7: F.19
- Chain B: A.21, M.25, L.29, A.111, C.112, W.115
- Chain L: I.9, A.10, L.13
- Ligands: CLA.21, CLA.27, CLA.28, BCR.32, BCR.33, LMG.37, SQD.41, LMT.88
Ligand excluded by PLIPBCR.32: 20 residues within 4Å:- Chain 7: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40
- Ligands: CLA.21, BCR.31, BCR.33, LMT.43, SQD.95, LMG.160
Ligand excluded by PLIPBCR.33: 13 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, G.105
- Ligands: CLA.21, CLA.27, BCR.31, BCR.32, DGD.42, LMT.43
Ligand excluded by PLIPBCR.34: 14 residues within 4Å:- Chain 7: F.18, F.22
- Chain B: L.106, L.109, A.110, C.112, W.113, Y.117
- Ligands: CLA.19, CLA.20, CLA.29, CLA.30, LMT.39, SQD.95
Ligand excluded by PLIPBCR.54: 21 residues within 4Å:- Chain C: A.43, G.46, L.47, V.104, L.107, I.108, S.110, A.111, G.114
- Chain J: Y.6, F.9, F.23, L.26, A.27, W.30
- Chain T: L.9, V.13, V.20
- Ligands: CLA.57, BCR.86, BCR.94
Ligand excluded by PLIPBCR.56: 19 residues within 4Å:- Chain C: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252
- Chain H: V.20, F.23, L.24
- Ligands: CLA.45, CLA.49, CLA.50, CLA.51
Ligand excluded by PLIPBCR.71: 17 residues within 4Å:- Chain D: Y.42, G.46, G.47, L.49, T.50, F.101, W.104, F.113
- Chain F: P.28, T.29, F.32, L.33
- Chain I: V.20, V.24
- Ligands: LMG.68, DGD.74, PL9.84
Ligand excluded by PLIPBCR.80: 15 residues within 4Å:- Chain G: F.33, M.34, L.36, F.37, F.40, I.43
- Chain R: T.1, I.2, L.6, F.10
- Ligands: CLA.15, CLA.17, CLA.23, CLA.24, CLA.70
Ligand excluded by PLIPBCR.81: 16 residues within 4Å:- Chain A: V.35, I.38, P.39, L.42, A.43, I.50, A.51, A.55, I.96, W.105, L.106
- Chain H: F.15
- Ligands: CLA.5, SQD.14, DGD.111, LMT.113
Ligand excluded by PLIPBCR.85: 12 residues within 4Å:- Chain I: I.21, V.24, G.25, F.28, Y.29, Y.32
- Ligands: SQD.9, LHG.11, DGD.60, DGD.62, LMG.63, BCR.86
Ligand excluded by PLIPBCR.86: 21 residues within 4Å:- Chain I: A.13, T.14, G.17, M.18
- Chain J: L.12, L.16, I.19, L.22, F.23, A.25, F.28, V.29, A.32
- Chain Q: I.28, G.29, G.32
- Chain T: V.13, S.16, F.17
- Ligands: BCR.54, BCR.85
Ligand excluded by PLIPBCR.90: 19 residues within 4Å:- Chain 5: I.9, A.10, L.13
- Chain N: F.19
- Chain V: A.21, A.22, M.25, L.29, A.111, C.112, W.115
- Ligands: BCR.91, SQD.110, CLA.120, CLA.126, BCR.127, CLA.128, LMG.130, LMT.179
Ligand excluded by PLIPBCR.91: 20 residues within 4Å:- Chain N: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.33, S.36, M.37, Y.40
- Ligands: SQD.14, LMG.69, BCR.90, LMT.112, CLA.120, BCR.127
Ligand excluded by PLIPBCR.92: 15 residues within 4Å:- Chain N: F.18, F.22
- Chain V: L.106, L.109, A.110, C.112, W.113, Y.117
- Ligands: SQD.14, DGD.111, CLA.118, CLA.119, CLA.129, CLA.131, LMT.134
Ligand excluded by PLIPBCR.94: 15 residues within 4Å:- Chain C: F.100, V.104, I.108, S.109, V.112, L.113
- Chain J: Y.6
- Chain T: V.51, V.54, G.55, N.58
- Ligands: BCR.54, CLA.59, CLA.61, LMG.64
Ligand excluded by PLIPBCR.127: 13 residues within 4Å:- Chain V: L.29, G.32, W.33, S.36, I.101, V.102, G.105
- Ligands: BCR.90, BCR.91, DGD.111, LMT.112, CLA.120, CLA.126
Ligand excluded by PLIPBCR.146: 21 residues within 4Å:- Chain 3: Y.6, F.9, F.23, L.26, A.27, W.30
- Chain W: A.43, G.46, L.47, V.104, L.107, I.108, S.110, A.111, G.114
- Ligands: CLA.145, BCR.148, BCR.178
- Chain d: L.9, V.13, V.20
Ligand excluded by PLIPBCR.148: 16 residues within 4Å:- Chain 3: Y.6
- Chain W: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Ligands: BCR.146, CLA.147, CLA.149, LMG.155
- Chain d: V.51, V.54, G.55, N.58
Ligand excluded by PLIPBCR.152: 19 residues within 4Å:- Chain 1: V.20, F.23, L.24
- Chain W: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252
- Ligands: CLA.135, CLA.139, CLA.140, CLA.141
Ligand excluded by PLIPBCR.169: 16 residues within 4Å:- Chain 2: V.20, V.24
- Chain X: Y.42, G.46, G.47, L.49, T.50, F.101, W.104, F.113
- Chain Z: P.28, T.29, F.32, L.33
- Ligands: DGD.163, LMG.164
Ligand excluded by PLIPBCR.171: 14 residues within 4Å:- Chain 0: F.33, M.34, L.36, F.37, F.40, I.43
- Ligands: CLA.114, CLA.122, CLA.123, CLA.161
- Chain b: T.1, I.2, L.6, F.10
Ligand excluded by PLIPBCR.173: 17 residues within 4Å:- Chain 1: F.15
- Chain U: V.35, I.38, L.42, A.43, C.47, I.50, A.51, A.55, I.96, L.102, W.105, L.106
- Ligands: DGD.42, LMT.44, SQD.95, CLA.101
Ligand excluded by PLIPBCR.177: 12 residues within 4Å:- Chain 2: I.21, V.24, G.25, F.28, Y.29, Y.32
- Ligands: SQD.103, LHG.106, DGD.151, LMG.153, DGD.154, BCR.178
Ligand excluded by PLIPBCR.178: 22 residues within 4Å:- Chain 2: A.13, T.14, G.17, M.18
- Chain 3: L.12, L.16, I.19, L.22, F.23, A.25, F.28, V.29, A.32
- Ligands: LHG.106, BCR.146, BCR.177
- Chain a: I.28, G.29, G.32
- Chain d: V.13, S.16, F.17
Ligand excluded by PLIP- 14 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.39: 7 residues within 4Å:- Chain B: W.91, L.149, F.162
- Ligands: CLA.18, CLA.20, BCR.34, DGD.42
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:W.91, B:L.149
LMT.40: 10 residues within 4Å:- Chain B: R.224, L.225, K.227, A.228
- Chain D: F.15, D.16, D.19
- Chain G: A.31, M.34
- Ligands: SQD.38
10 PLIP interactions:7 interactions with chain B, 2 interactions with chain G, 1 interactions with chain D- Hydrophobic interactions: B:L.225, B:A.228, G:A.31, G:M.34
- Hydrogen bonds: B:R.224, B:R.224, B:K.227, B:K.227, D:D.19
- Salt bridges: B:R.224
LMT.43: 13 residues within 4Å:- Chain 7: I.4, V.7, F.8, A.11
- Chain B: S.36, Y.40, A.43, T.44, L.437
- Chain U: L.72
- Ligands: BCR.32, BCR.33, LMT.88
6 PLIP interactions:2 interactions with chain B, 3 interactions with chain 7, 1 interactions with chain U- Hydrophobic interactions: B:Y.40, B:A.43, 7:I.4, 7:V.7, 7:A.11, U:L.72
LMT.44: 10 residues within 4Å:- Chain 1: M.1, L.4
- Chain 6: K.69
- Chain B: G.85, D.87
- Chain U: A.100
- Ligands: DGD.42, CLA.101, BCR.173, LMG.174
7 PLIP interactions:3 interactions with chain 1, 3 interactions with chain B, 1 interactions with chain 6- Hydrophobic interactions: 1:M.1, 1:L.4, 1:L.4
- Hydrogen bonds: B:G.85, B:D.87, B:D.87
- Salt bridges: 6:K.69
LMT.75: 8 residues within 4Å:- Chain D: L.92, W.93, G.99
- Chain R: I.11, S.15, G.16
- Ligands: CLA.70, DGD.74
2 PLIP interactions:2 interactions with chain R- Hydrogen bonds: R:S.15, R:S.15
LMT.83: 7 residues within 4Å:- Chain H: T.3, I.6, T.7, I.10, V.11, F.14
- Ligands: LMG.82
5 PLIP interactions:5 interactions with chain H- Hydrophobic interactions: H:T.7, H:I.10, H:V.11, H:F.14, H:F.14
LMT.88: 12 residues within 4Å:- Chain 5: M.1, E.2, A.12
- Chain 7: M.1, I.4, F.8
- Chain B: Y.40
- Chain L: Q.5, L.6
- Ligands: BCR.31, LMG.37, LMT.43
7 PLIP interactions:4 interactions with chain 7, 2 interactions with chain 5, 1 interactions with chain L- Hydrophobic interactions: 7:I.4, 7:I.4, 7:F.8, 7:F.8, 5:A.12
- Hydrogen bonds: 5:E.2, L:Q.5
LMT.112: 14 residues within 4Å:- Chain A: L.72
- Chain N: I.4, V.7, F.8, A.11
- Chain V: S.36, L.39, A.43, T.44, T.436, L.437
- Ligands: BCR.91, BCR.127, LMT.179
7 PLIP interactions:1 interactions with chain A, 3 interactions with chain N, 3 interactions with chain V- Hydrophobic interactions: A:L.72, N:I.4, N:V.7, N:A.11, V:L.39, V:A.43
- Hydrogen bonds: V:T.44
LMT.113: 10 residues within 4Å:- Chain A: A.100
- Chain H: M.1, L.4
- Chain M: K.69
- Chain V: G.85, D.87
- Ligands: CLA.5, BCR.81, LMG.82, DGD.111
6 PLIP interactions:2 interactions with chain H, 3 interactions with chain V, 1 interactions with chain M- Hydrophobic interactions: H:L.4, H:L.4
- Hydrogen bonds: V:G.85, V:D.87, V:D.87
- Salt bridges: M:K.69
LMT.132: 10 residues within 4Å:- Chain 0: A.31, M.34
- Chain V: R.224, L.225, K.227, A.228
- Chain X: F.15, D.16, D.19
- Ligands: SQD.162
10 PLIP interactions:7 interactions with chain V, 2 interactions with chain 0, 1 interactions with chain X- Hydrophobic interactions: V:L.225, V:A.228, 0:A.31, 0:M.34
- Hydrogen bonds: V:R.224, V:R.224, V:K.227, V:K.227, X:D.19
- Salt bridges: V:R.224
LMT.134: 7 residues within 4Å:- Chain V: W.91, L.149, F.162
- Ligands: BCR.92, DGD.111, CLA.117, CLA.119
2 PLIP interactions:2 interactions with chain V- Hydrophobic interactions: V:W.91, V:L.149
LMT.165: 8 residues within 4Å:- Chain X: L.92, W.93, G.99
- Ligands: CLA.161, DGD.163
- Chain b: I.11, S.15, G.16
2 PLIP interactions:2 interactions with chain b- Hydrogen bonds: b:S.15, b:S.15
LMT.175: 7 residues within 4Å:- Chain 1: T.3, I.6, T.7, I.10, V.11, F.14
- Ligands: LMG.174
5 PLIP interactions:5 interactions with chain 1- Hydrophobic interactions: 1:T.7, 1:I.10, 1:V.11, 1:F.14, 1:F.14
LMT.179: 12 residues within 4Å:- Chain 5: Q.5, L.6
- Chain L: M.1, E.2, A.12
- Chain N: M.1, I.4, F.8
- Chain V: Y.40
- Ligands: BCR.90, LMT.112, LMG.130
7 PLIP interactions:3 interactions with chain N, 1 interactions with chain 5, 3 interactions with chain L- Hydrophobic interactions: N:I.4, N:I.4, N:F.8, L:A.12
- Hydrogen bonds: 5:Q.5, L:M.1, L:E.2
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.72: 9 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.214, Y.244, K.264, H.268
- Ligands: FE2.13
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:Y.244, D:K.264, A:Y.246, A:Y.246
BCT.166: 10 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, H.272
- Chain X: H.214, Y.244, K.264, H.268
- Ligands: FE2.108
4 PLIP interactions:3 interactions with chain X, 1 interactions with chain U- Hydrogen bonds: X:Y.244, X:Y.244, X:K.264, U:Y.246
- 2 x CL: CHLORIDE ION(Non-functional Binders)
CL.73: 4 residues within 4Å:- Chain A: N.181, H.332, E.333
- Chain D: K.317
Ligand excluded by PLIPCL.109: 4 residues within 4Å:- Chain U: N.181, H.332, E.333
- Chain X: K.317
Ligand excluded by PLIP- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.77: 19 residues within 4Å:- Chain E: R.7, F.9, I.12, I.13, R.17, Y.18, H.22, T.25, I.26, L.29
- Chain F: I.14, F.15, R.18, W.19, H.23, A.26, I.30
- Chain S: X.14, X.17
23 PLIP interactions:13 interactions with chain E, 10 interactions with chain F,- Hydrophobic interactions: E:F.9, E:I.12, E:I.13, E:T.25, E:I.26, E:L.29, E:L.29, F:I.14, F:F.15, F:A.26, F:I.30, F:I.30
- Salt bridges: E:R.7, E:R.17, F:R.18
- pi-Stacking: E:Y.18, E:H.22, E:H.22, F:W.19, F:W.19, F:H.23, F:H.23
- Metal complexes: E:H.22
HEM.93: 21 residues within 4Å:- Chain C: A.381
- Chain P: A.36, C.37, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, Y.82, H.92, P.93, I.115
17 PLIP interactions:16 interactions with chain P, 1 interactions with chain C,- Hydrophobic interactions: P:A.36, P:T.46, P:N.49, P:L.52, P:L.54, P:L.72, P:Y.75, P:P.93, P:I.115, C:A.381
- Hydrogen bonds: P:Y.82
- pi-Stacking: P:H.41, P:H.41, P:Y.75
- pi-Cation interactions: P:H.41
- Metal complexes: P:H.41, P:H.92
HEM.167: 19 residues within 4Å:- Chain Y: R.7, F.9, I.12, I.13, R.17, Y.18, H.22, T.25, I.26, L.29
- Chain Z: I.14, F.15, R.18, W.19, H.23, A.26, I.30
- Chain c: X.14, X.17
23 PLIP interactions:13 interactions with chain Y, 10 interactions with chain Z,- Hydrophobic interactions: Y:F.9, Y:I.12, Y:I.13, Y:T.25, Y:I.26, Y:L.29, Y:L.29, Z:I.14, Z:F.15, Z:A.26, Z:I.30, Z:I.30
- Salt bridges: Y:R.7, Y:R.17, Z:R.18
- pi-Stacking: Y:Y.18, Y:H.22, Y:H.22, Z:W.19, Z:W.19, Z:H.23, Z:H.23
- Metal complexes: Y:H.22
HEM.182: 21 residues within 4Å:- Chain 9: A.36, C.37, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, Y.82, H.92, P.93, I.115
- Chain W: A.381
17 PLIP interactions:16 interactions with chain 9, 1 interactions with chain W,- Hydrophobic interactions: 9:A.36, 9:T.46, 9:N.49, 9:L.52, 9:L.54, 9:L.72, 9:Y.75, 9:P.93, 9:I.115, W:A.381
- Hydrogen bonds: 9:Y.82
- pi-Stacking: 9:H.41, 9:H.41, 9:Y.75
- pi-Cation interactions: 9:H.41
- Metal complexes: 9:H.41, 9:H.92
- 2 x CA: CALCIUM ION(Non-covalent)
CA.89: 3 residues within 4Å:- Chain M: E.55, E.114, H.231
No protein-ligand interaction detected (PLIP)CA.181: 3 residues within 4Å:- Chain 6: E.55, E.114, H.231
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kern, J. et al., Room temperature femtosecond X-ray diffraction of photosystem II microcrystals. Proc.Natl.Acad.Sci.USA (2012)
- Release Date
- 2012-06-20
- Peptides
- Photosystem Q(B) protein 1: AU
Photosystem II core light harvesting protein: BV
Photosystem II CP43 protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II reaction center protein T: N7
Photosystem II 12 kDa extrinsic protein: O8
Cytochrome c-550: P9
Photosystem II reaction center protein ycf12: Qa
Photosystem II reaction center protein X: Rb
Photosystem II reaction center protein Y: Sc
Photosystem II reaction center protein Z: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
GB
BV
NC
CW
PD
DX
QE
EY
RF
FZ
SG
H0
WH
I1
aI
J2
bJ
K3
cK
L4
dL
M5
eM
O6
fN
T7
gO
U8
hP
V9
iQ
ya
mR
Xb
jS
Yc
kT
Zd
l - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 4fby.1
fs X-ray diffraction of Photosystem II
Photosystem Q(B) protein 1
Toggle Identical (AU)Photosystem II core light harvesting protein
Toggle Identical (BV)Photosystem II CP43 protein
Toggle Identical (CW)Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Toggle Identical (EY)Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Toggle Identical (G0)Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Toggle Identical (K4)Photosystem II reaction center protein M
Toggle Identical (L5)Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II reaction center protein T
Toggle Identical (N7)Photosystem II 12 kDa extrinsic protein
Toggle Identical (O8)Cytochrome c-550
Toggle Identical (P9)Photosystem II reaction center protein ycf12
Toggle Identical (Qa)Photosystem II reaction center protein X
Toggle Identical (Rb)Photosystem II reaction center protein Y
Toggle Identical (Sc)Photosystem II reaction center protein Z
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3j9m.51 | 3kzi.1 | 3wu2.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4uq8.1 | 4v62.1 | 4v62.2 | 4v82.1 more...less...5b5e.1 | 5b66.1 | 5cod.1 | 5cod.2 | 5cod.3 | 5cod.4 | 5cod.5 | 5cod.6 | 5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5j4z.41 | 5j4z.42 | 5j7y.41 | 5j7y.42 | 5j8k.41 | 5j8k.42 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5ool.1 | 5oom.1 | 5tis.1 | 5v2c.1 | 5vy9.1 | 5vya.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6c0f.1 | 6cb1.1 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6h8k.22 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6nu2.51 | 6nu3.51 | 6uxv.1 | 6v8o.1 | 6v92.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 6yxx.76 | 7a5g.52 | 7a5h.1 | 7a5i.52 | 7a5i.53 | 7a5j.51 | 7a5k.86 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7eeb.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7o9k.67 | 7pd3.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7w3b.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1