SMTL ID : 6cb1.1

Yeast nucleolar pre-60S ribosomal subunit (state 3)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Sanghai, Z.A. et al., Modular assembly of the nucleolar pre-60S ribosomal subunit. Nature (2018)
Release Date
2018-03-14
Peptides
Ribosome biogenesis protein NSA1: D
60S ribosomal protein L4-A: E
Protein MAK16: F
60S ribosomal protein L6-A: G
60S ribosomal protein L7-A: H
60S ribosomal protein L8-A: I
Ribosome production factor 1: J
Proteasome-interacting protein CIC1: K
60S ribosomal protein L13-A: L
60S ribosomal protein L14-A: M
60S ribosomal protein L15-A: N
60S ribosomal protein L16-A: O
60S ribosomal protein L17-A: P
60S ribosomal protein L18-A: Q
60S ribosomal protein L20-A: R
60S ribosomal protein L25: S
60S ribosomal protein L26-A: T
60S ribosomal protein L27-A: U
Nucleolar protein 16: V
Ribosome biogenesis protein BRX1: W
60S ribosomal protein L30: X
Ribosome biogenesis protein YTM1: Y
60S ribosomal protein L32: Z
60S ribosomal protein L33-A: 0
60S ribosomal protein L34-A: 1
60S ribosomal protein L35-A: 2
60S ribosomal protein L36-A: 3
60S ribosomal protein L37-A: 4
60S ribosomal protein L38: 5
rRNA-processing protein EBP2: 6
Pescadillo homolog: 7
Ribosome biogenesis protein 15: 8
ATP-dependent RNA helicase HAS1: 9
Ribosome biogenesis protein ERB1: a
Ribosome biogenesis protein RLP7: b
BRX1 associated peptide: c
Ribosomal RNA-processing protein 1: d
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
A
E
C
F
D
G
E
H
F
I
G
J
I
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
S
S
X
T
Y
U
Z
V
7
W
b
X
c
Y
d
Z
e
0
f
1
g
2
h
3
i
4
j
5
k
6
m
7
n
8
o
9
p
a
s
b
t
c
x
d
z

Ribosome biogenesis protein NSA1

60S ribosomal protein L4-A

Protein MAK16

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

Ribosome production factor 1

Proteasome-interacting protein CIC1

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L20-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

Nucleolar protein 16

Ribosome biogenesis protein BRX1

60S ribosomal protein L30

Ribosome biogenesis protein YTM1

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

rRNA-processing protein EBP2

Pescadillo homolog

Ribosome biogenesis protein 15

ATP-dependent RNA helicase HAS1

Ribosome biogenesis protein ERB1

Ribosome biogenesis protein RLP7

BRX1 associated peptide

Ribosomal RNA-processing protein 1

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