SMTL ID : 7pec.1

cryo-EM structure of DEPTOR bound to human mTOR complex 1, DEPt-bound subset local refinement

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)

IHP.1: 9 residues within 4Å: Chain A: R.1628, K.1655, S.1658, Y.1698, K.1702, R.1749, K.1753, W.1786, K.1788 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.1658 Salt bridges: A:K.1655, A:K.1655, A:K.1662, A:K.1702, A:K.1702, A:K.1702, A:K.1706, A:R.1749, A:R.1749, A:K.1753, A:K.1788, A:K.1788

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Walchli, M. et al., Regulation of human mTOR complexes by DEPTOR. Elife (2021)

Release Date

2021-09-08

Peptides

Serine/threonine-protein kinase mTOR: A
Target of rapamycin complex subunit LST8: B
Regulatory-associated protein of mTOR: C
DEP domain-containing mTOR-interacting protein: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
E

D
I

Serine/threonine-protein kinase mTOR

Target of rapamycin complex subunit LST8

Regulatory-associated protein of mTOR

DEP domain-containing mTOR-interacting protein

Related Entries With Identical Sequence