SMTL ID : 7rkk.2 (1 other biounit)

Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with II399 (C2 space group)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

monomer

Ligands

1 x 5R4: 3-[3-(acetyl{[(1R,2R,3S,4R)-4-(4-chloro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-2,3-dihydroxycyclopentyl]methyl}amino)prop-1-yn-1-yl]benzamide(Non-covalent)

5R4.1: 27 residues within 4Å: Chain A: K.27, Y.30, F.34, Y.39, Y.43, G.82, G.84, D.104, Y.105, S.106, N.109, C.160, D.161, V.162, T.163, T.182, L.183, C.184, D.186, A.188, D.216, A.217, S.220, Y.222, Y.223, S.232, Y.261 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.39, A:Y.43, A:Y.105, A:A.188, A:Y.223, A:Y.223, A:Y.261 Hydrogen bonds: A:D.104, A:Y.105, A:S.106, A:N.109, A:V.162, A:D.186, A:S.220, A:Y.222, A:S.232 pi-Stacking: A:Y.30, A:Y.223 Halogen bonds: A:T.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iyamu, I.D. et al., Exploring Unconventional SAM Analogues To Build Cell-Potent Bisubstrate Inhibitors for Nicotinamide N-Methyltransferase. Angew.Chem.Int.Ed.Engl. (2022)

Release Date

2022-07-20

Peptides

NNMT protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

NNMT protein

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