SMTL ID : 7sok.3 (3 other biounits)

Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor II329

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x 9XL: (2S)-2-amino-4-([3-(3-carbamoylphenyl)prop-2-yn-1-yl]{[(1R,2R,3S,4R)-4-(4-chloro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-2,3-dihydroxycyclopentyl]methyl}amino)butanoic acid(Non-covalent)

9XL.1: 32 residues within 4Å: Chain A: K.27, Y.30, F.34, Y.39, Y.43, Y.44, G.82, S.83, G.84, T.86, Y.88, Q.89, D.104, Y.105, S.106, N.109, C.160, D.161, V.162, T.163, T.182, L.183, C.184, D.186, A.188, D.216, A.217, S.220, Y.222, Y.223, S.232, Y.261 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Y.39, A:Y.43, A:Y.105, A:A.188, A:Y.223, A:Y.223, A:Y.261 Hydrogen bonds: A:Y.39, A:Y.105, A:S.106, A:N.109, A:V.162, A:T.182, A:T.182, A:S.220, A:S.232, A:S.232 Water bridges: A:T.182 pi-Stacking: A:Y.30, A:Y.223

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 3 residues within 4Å: Chain A: K.118, E.148, Q.152 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.118 Water bridges: A:Q.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iyamu, I. et al., Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor II329. To Be Published

Release Date

2022-11-02

Peptides

NNMT protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

NNMT protein

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