SMTL ID : 7rxc.1

CryoEM structure of KDELR with Legobody

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)
4 x POV: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wu, X. et al., Cryo-EM structure determination of small proteins by nanobody-binding scaffolds (Legobodies). Proc.Natl.Acad.Sci.USA (2021)
Release Date
2021-10-06
Peptides
Fab_8D3_2 heavy chain: A
Fab_8D3_2 light chain: B
Nb_KR: C
Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G: D
ER lumen protein-retaining receptor 2: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
H
B
L
C
N
D
B
E
K
Membrane
We predict this structure to be a membrane protein.

Fab_8D3_2 heavy chain

Fab_8D3_2 light chain

Nb_KR

Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G

ER lumen protein-retaining receptor 2

Related Entries With Identical Sequence

7r9d.1 | 7rxd.1 | 9bde.1 | 9bdt.1 | 9coo.1