SMTL ID : 7sse.1

Crystal structure of the WDR domain of human DCAF1 in complex with CYCA-117-70

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

homo-dimer

Ligands

1 x B1I: N-[(3R)-1-(3-fluorophenyl)piperidin-3-yl]-6-(morpholin-4-yl)pyrimidin-4-amine(Non-covalent)

B1I.1: 11 residues within 4Å: Chain A: T.22, A.62, T.64, Y.106, R.150, I.187, R.223, L.238, K.252, P.254, F.280 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.64, A:R.150, A:R.223, A:R.223 Hydrogen bonds: A:K.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kimani, S.W. et al., Discovery of a Novel DCAF1 Ligand Using a Drug-Target Interaction Prediction Model: Generalizing Machine Learning to New Drug Targets. J.Chem.Inf.Model. (2023)

Release Date

2021-12-15

Peptides

DDB1- and CUL4-associated factor 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DDB1- and CUL4-associated factor 1

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