SMTL ID : 7tut.1

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
220 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
5 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Smalinskaite, L. et al., Mechanism of an intramembrane chaperone for multipass membrane proteins. Nature (2022)
Release Date
2022-10-19
Peptides
uL2: A
uL4: B
uL18: C
eL6: D
uL30: E
eL8: F
uL6: G
uL16: H
uL5: I
eL13: J
eL14: K
eL15: L
uL13: M
uL22: N
eL18: O
eL19: P
eL20: Q
eL21: R
eL22: S
uL14: T
eL24: U
eL23: V
uL24: W
eL27: X
uL15: Y
eL29: Z
eL30: 0
eL31: 1
eL32: 2
eL33: 3
eL34: 4
eL35: 5
eL36: 6
eL37: 7
eL38: 8
eL39: 9
eL40: a
eL41: b
eL42: c
eL43: d
eL28: f
uL3: i
Nascent chain: j
Protein transport protein Sec61 subunit alpha isoform 1: k
Protein transport protein Sec61 subunit beta: l
Protein transport protein Sec61 gamma: m
Coiled-coil domain containing 47: n
PAT complex subunit Asterix: o
Nicalin: p
Transmembrane protein 147: q
Calcium load-activated calcium channel: r
Obligate partner of TMCO1 insertase: t
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
L
K
M
L
N
M
O
N
P
O
Q
P
R
Q
S
R
T
S
U
T
V
U
W
V
X
W
Y
X
Z
Y
a
Z
b
0
c
1
d
2
e
3
f
4
g
5
h
6
i
7
j
8
k
9
l
a
m
b
n
c
o
d
p
f
r
i
w
j
B
k
1
l
2
m
3
n
4
o
5
p
7
q
6
r
8
t
9
Membrane
We predict this structure to be a membrane protein.

uL2

uL4

uL18

eL6

uL30

eL8

uL6

uL16

uL5

eL13

eL14

eL15

uL13

uL22

eL18

eL19

eL20

eL21

eL22

uL14

eL24

eL23

uL24

eL27

uL15

eL29

eL30

eL31

eL32

eL33

eL34

eL35

eL36

eL37

eL38

eL39

eL40

eL41

eL42

eL43

eL28

uL3

Nascent chain

Protein transport protein Sec61 subunit alpha isoform 1

Protein transport protein Sec61 subunit beta

Protein transport protein Sec61 gamma

Coiled-coil domain containing 47

PAT complex subunit Asterix

Nicalin

Transmembrane protein 147

Calcium load-activated calcium channel

Obligate partner of TMCO1 insertase

Related Entries With Identical Sequence

2wwb.1 | 3j7o.1 | 3j7q.1 | 3j92.1 | 3jc2.1 | 4cg5.1 | 4cg6.1 | 4cg7.1 | 4d5y.1 | 4d67.1 | 4v5z.17 | 4v5z.20 | 4v5z.27 | 4v5z.32 | 4v5z.36 | 4v5z.37 | 4v5z.40 | 4v5z.41 | 4v5z.43 | 4v5z.44 | 4v5z.46 | 4xxb.1 | 5aj0.1 | 5aj0.10 | 5aj0.18 | 5aj0.20 | 5aj0.22 | 5aj0.23 | 5aj0.25 | 5aj0.26  more...