SMTL ID : 8ap9.1

rotor of the Trypanosoma brucei mitochondrial ATP synthase dimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-10-mer

Ligands

1 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)

UTP.1: 13 residues within 4Å: Chain A: N.208, E.209, E.210 Chain B: N.76, Y.79, K.88 Chain D: R.82 Chain E: V.78, R.82 Chain H: R.82 Chain J: R.82 Chain K: R.82 Chain L: R.82 14 PLIP interactions: 1 interactions with chain L, 5 interactions with chain B, 1 interactions with chain D, 2 interactions with chain I, 2 interactions with chain K, 2 interactions with chain J, 1 interactions with chain E Salt bridges: L:R.82, B:K.88, B:K.88, B:K.88, I:R.82, I:R.82, K:R.82, J:R.82 Hydrogen bonds: B:N.76, B:Y.79, D:R.82, K:R.82, J:R.82 pi-Cation interactions: E:R.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gahura, O. et al., An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases. Nat Commun (2022)

Release Date

2022-10-26

Peptides

ATP synthase gamma subunit: A
ATP synthase, epsilon chain, putative: B
ATP synthase subunit epsilon, mitochondrial: C
ATPase subunit 9, putative: DEFGHIJKLM

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

D
O

E
P

F
Q

G
R

H
S

I
T

J
U

K
V

L
W

M
X

Membrane

We predict this structure to be a membrane protein.
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ATP synthase gamma subunit

ATP synthase, epsilon chain, putative

ATP synthase subunit epsilon, mitochondrial

ATPase subunit 9, putative

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