SMTL ID : 8cma.1

SARS-CoV-2 Delta-RBD complexed with BA.4/5-35 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.29 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain B: F.16, N.17 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.16 Hydrogen bonds: B:N.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, C. et al., Emerging variants develop total escape from potent monoclonal antibodies induced by BA.4/5 infection. Nat Commun (2024)

Release Date

2024-02-28

Peptides

BA.4/5-35 heavy chain: A
Spike protein S1: B
BA.4/5-35 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
E

C
L

BA.4/5-35 heavy chain

Spike protein S1

BA.4/5-35 light chain

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