SMTL ID : 8qrf.1

SARS-CoV-2 delta RBD complexed with XBB-6 and beta-49 Fabs

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.70 Å
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA- FUC: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Liu, C. et al., A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity. Cell Rep Med (2024)
Release Date
2024-05-08
Peptides
Spike protein S1: A
Beta-49 light chain: B
Beta-49 heavy chain: C
XBB-6 heavy chain: D
XBB-6 light chain: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E
B
B
C
A
D
H
E
L

Spike protein S1

Beta-49 light chain

Beta-49 heavy chain

XBB-6 heavy chain

XBB-6 light chain

Related Entries With Identical Sequence

7q0g.1 | 7q6e.1 | 8bbn.1 | 8bbn.2 | 8bbn.3 | 8bbo.1 | 8bcz.1 | 8c3v.1 | 8c3v.2 | 8c3v.3 | 8cbd.1 | 8cbd.2 | 8cbd.3 | 8cbe.1 | 8cbf.1 | 8cii.1 | 8cma.1 | 8qrg.1 | 8qzr.1 | 8qzr.2 | 8r80.1 | 8r80.2