SMTL ID : 8efq.1

DAMGO-bound mu-opioid receptor-Gi complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x TYR- DAL- GLY- MEA: DAMGO(Non-covalent)

TYR-DAL-GLY-MEA.1: 14 residues within 4Å: Chain D: Q.125, N.128, V.144, D.148, M.152, C.218, V.237, I.297, H.298, V.301, W.319, I.323, Y.327 Ligands: ETA.2 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:Q.125, D:V.144, D:V.237, D:I.297, D:I.297 Hydrogen bonds: D:D.148, D:H.298

1 x ETA: ETHANOLAMINE(Non-covalent)

ETA.2: 3 residues within 4Å: Chain D: T.219 Ligands: TYR-DAL-GLY-MEA.1, TYR-DAL-GLY-MEA.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhuang, Y. et al., Molecular recognition of morphine and fentanyl by the human mu-opioid receptor. Cell (2022)

Release Date

2022-11-09

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Mu-type opioid receptor: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Mu-type opioid receptor

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