SMTL ID : 8ign.1

Crystal structure of SARS-CoV-2 main protease in complex with RAY1216

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.02 Å
Oligo State
homo-dimer
Ligands
2 x 7ON: (3~{S},3~{a}~{S},6~{a}~{R})-2-[(2~{S})-2-cyclohexyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]ethanoyl]-~{N}-[(2~{S})-4-(cyclopentylamino)-3,4-bis(oxidanylidene)-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamide(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Chen, X. et al., Preclinical evaluation of the SARS-CoV-2 M pro inhibitor RAY1216 shows improved pharmacokinetics compared with nirmatrelvir. Nat Microbiol (2024)
Release Date
2023-04-05
Peptides
3C-like proteinase nsp5: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
A

3C-like proteinase nsp5

Toggle Identical (AB)

Related Entries With Identical Sequence

5r7y.1 | 5r7z.1 | 5r80.1 | 5r81.1 | 5r82.1 | 5r83.1 | 5r84.1 | 5r8t.1 | 5re4.1 | 5re5.1 | 5re6.1 | 5re7.1 | 5re8.1 | 5re9.1 | 5rea.1 | 5reb.1 | 5rec.1 | 5red.1 | 5ree.1 | 5ref.1 | 5reg.1 | 5reh.1 | 5rei.1 | 5rej.1 | 5rek.1 | 5rel.1 | 5rem.1 | 5ren.1 | 5reo.1 | 5rep.1  more...