SMTL ID : 8jv0.2 (1 other biounit)

Crystal structure of the SLA-2*1001 allele and ASFV antigenic peptide at 2.2A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x TYR- MET- ASN- CYS- SER- LEU- PRO- THR- TYR: TYR-MET-ASN-CYS-SER-LEU-PRO-THR-TYR(Non-covalent)

TYR-MET-ASN-CYS-SER-LEU-PRO-THR-TYR.1: 26 residues within 4Å: Chain A: Y.7, Y.9, I.24, M.45, R.62, E.63, I.66, S.67, N.77, T.80, Y.84, L.95, R.97, Y.99, D.116, Y.123, S.143, K.146, R.147, E.152, R.155, M.156, Y.159, R.163, W.167, Y.171 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:N.77, A:L.95, A:Y.123, A:Y.159, A:R.163, A:W.167, A:W.167 Hydrogen bonds: A:Y.7, A:Y.59, A:R.62, A:R.62, A:E.63, A:R.97, A:R.97, A:Y.99, A:Y.99, A:S.143, A:R.147, A:E.152, A:Y.159, A:R.163, A:Y.171 Water bridges: A:Y.9, A:E.63, A:N.70 Salt bridges: A:K.146 pi-Stacking: A:W.167 pi-Cation interactions: A:R.62, A:R.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, S., Crystal structure of the SLA-2*1001 allele and ASFV antigenic peptide at 2.2A resolution. To Be Published

Release Date

2024-06-05

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

MHC class I antigen

Beta-2-microglobulin

Related Entries With Identical Sequence