SMTL ID : 8kdi.1

Structure of apo inward-open LAT1-CD98hc-Fab170 in nanodisc, consensus map

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.58 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: E.352, N.353, N.382 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.353, A:N.382 NAG.2: 2 residues within 4Å: Chain A: S.505, N.507 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.505 NAG.3: 1 residues within 4Å: Chain A: N.366 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.366 NAG.4: 1 residues within 4Å: Chain A: N.425 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, Y., Structural basis of anticancer drug recognition and amino acid transport by LAT1. To Be Published

Release Date

2025-02-12

Peptides

4F2 cell-surface antigen heavy chain: A
Large neutral amino acids transporter small subunit 1: B
Fab170 light chain: C
Fab170 heavy chain: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
L

D
H

Membrane

We predict this structure to be a membrane protein.
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4F2 cell-surface antigen heavy chain

Large neutral amino acids transporter small subunit 1

Fab170 light chain

Fab170 heavy chain

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