- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 3 x ZN: ZINC ION(Non-covalent)
- 97 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.3: 1 residues within 4Å:- Chain C: A.2903
No protein-ligand interaction detected (PLIP)MG.4: 5 residues within 4Å:- Chain C: G.948, G.956, A.3051, G.3052, A.3053
No protein-ligand interaction detected (PLIP)MG.5: 2 residues within 4Å:- Chain C: A.3051, G.3052
No protein-ligand interaction detected (PLIP)MG.6: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.7: 2 residues within 4Å:- Chain C: C.1561, G.1562
No protein-ligand interaction detected (PLIP)MG.8: 1 residues within 4Å:- Chain C: C.2421
No protein-ligand interaction detected (PLIP)MG.9: 2 residues within 4Å:- Chain C: A.1951, G.1952
No protein-ligand interaction detected (PLIP)MG.10: 3 residues within 4Å:- Chain 8: N.56
- Chain C: G.1438, U.1439
No protein-ligand interaction detected (PLIP)MG.11: 3 residues within 4Å:- Chain C: U.1432, U.1433
- Chain E: A.17
No protein-ligand interaction detected (PLIP)MG.12: 1 residues within 4Å:- Chain C: C.348
No protein-ligand interaction detected (PLIP)MG.13: 1 residues within 4Å:- Chain C: A.1427
No protein-ligand interaction detected (PLIP)MG.14: 1 residues within 4Å:- Chain C: U.419
No protein-ligand interaction detected (PLIP)MG.15: 2 residues within 4Å:- Chain C: A.1483, G.1484
No protein-ligand interaction detected (PLIP)MG.16: 4 residues within 4Å:- Chain C: A.2436, U.2437, G.2479
- Ligands: MG.71
No protein-ligand interaction detected (PLIP)MG.17: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.18: 3 residues within 4Å:- Chain C: A.1201
- Chain K: R.223, D.224
1 PLIP interactions:1 interactions with chain K- Metal complexes: K:D.224
MG.19: 2 residues within 4Å:- Chain C: A.838, G.966
No protein-ligand interaction detected (PLIP)MG.20: 2 residues within 4Å:- Chain C: A.994, G.995
No protein-ligand interaction detected (PLIP)MG.21: 1 residues within 4Å:- Chain C: C.666
No protein-ligand interaction detected (PLIP)MG.22: 4 residues within 4Å:- Chain C: G.1208, G.1209, A.1210
- Chain S: K.26
No protein-ligand interaction detected (PLIP)MG.23: 2 residues within 4Å:- Chain C: G.683, C.1466
No protein-ligand interaction detected (PLIP)MG.24: 2 residues within 4Å:- Chain C: A.1467, G.1468
No protein-ligand interaction detected (PLIP)MG.25: 3 residues within 4Å:- Chain C: G.41, C.42, G.2500
No protein-ligand interaction detected (PLIP)MG.26: 3 residues within 4Å:- Chain C: A.39, G.41, C.42
No protein-ligand interaction detected (PLIP)MG.27: 1 residues within 4Å:- Chain C: A.39
No protein-ligand interaction detected (PLIP)MG.28: 3 residues within 4Å:- Chain C: C.36, G.2705, U.2706
No protein-ligand interaction detected (PLIP)MG.29: 2 residues within 4Å:- Chain C: G.2701, U.2706
No protein-ligand interaction detected (PLIP)MG.30: 2 residues within 4Å:- Chain C: U.2504
- Chain F: P.205
No protein-ligand interaction detected (PLIP)MG.31: 3 residues within 4Å:- Chain C: A.848, A.849, U.935
No protein-ligand interaction detected (PLIP)MG.32: 2 residues within 4Å:- Chain C: A.849
- Chain d: Q.30
No protein-ligand interaction detected (PLIP)MG.33: 2 residues within 4Å:- Chain C: A.407, G.1451
No protein-ligand interaction detected (PLIP)MG.34: 5 residues within 4Å:- Chain 4: Q.39
- Chain C: C.990, C.991, G.2895, A.2896
No protein-ligand interaction detected (PLIP)MG.35: 2 residues within 4Å:- Chain C: A.1400, G.1401
No protein-ligand interaction detected (PLIP)MG.36: 2 residues within 4Å:- Chain C: G.982, G.1401
No protein-ligand interaction detected (PLIP)MG.37: 1 residues within 4Å:- Chain C: A.1029
No protein-ligand interaction detected (PLIP)MG.38: 2 residues within 4Å:- Chain C: G.1957, U.1958
No protein-ligand interaction detected (PLIP)MG.39: 4 residues within 4Å:- Chain C: A.1956, G.1957, U.1958, A.3014
No protein-ligand interaction detected (PLIP)MG.40: 1 residues within 4Å:- Chain C: G.33
No protein-ligand interaction detected (PLIP)MG.41: 1 residues within 4Å:- Chain C: A.49
No protein-ligand interaction detected (PLIP)MG.42: 2 residues within 4Å:- Chain C: A.51, A.52
No protein-ligand interaction detected (PLIP)MG.43: 2 residues within 4Å:- Chain C: U.951, U.954
No protein-ligand interaction detected (PLIP)MG.44: 3 residues within 4Å:- Chain C: A.2226, U.2228, U.2229
No protein-ligand interaction detected (PLIP)MG.45: 2 residues within 4Å:- Chain C: C.1899, G.1900
No protein-ligand interaction detected (PLIP)MG.46: 1 residues within 4Å:- Chain C: G.2966
No protein-ligand interaction detected (PLIP)MG.47: 3 residues within 4Å:- Chain C: A.2490, G.2491, G.2966
No protein-ligand interaction detected (PLIP)MG.48: 3 residues within 4Å:- Chain C: U.1567, G.1621, A.1622
No protein-ligand interaction detected (PLIP)MG.49: 2 residues within 4Å:- Chain C: C.1512, U.1926
No protein-ligand interaction detected (PLIP)MG.50: 3 residues within 4Å:- Chain C: U.1513, G.1514, U.1926
No protein-ligand interaction detected (PLIP)MG.51: 4 residues within 4Å:- Chain C: A.947, G.948, G.3052, A.3053
No protein-ligand interaction detected (PLIP)MG.52: 1 residues within 4Å:- Chain E: C.43
No protein-ligand interaction detected (PLIP)MG.53: 1 residues within 4Å:- Chain C: A.62
No protein-ligand interaction detected (PLIP)MG.54: 3 residues within 4Å:- Chain C: A.63, C.329, U.330
No protein-ligand interaction detected (PLIP)MG.55: 2 residues within 4Å:- Chain C: G.275, A.325
No protein-ligand interaction detected (PLIP)MG.56: 3 residues within 4Å:- Chain C: A.66, C.161, A.162
No protein-ligand interaction detected (PLIP)MG.57: 1 residues within 4Å:- Chain C: C.1550
No protein-ligand interaction detected (PLIP)MG.58: 2 residues within 4Å:- Chain C: U.971, A.994
No protein-ligand interaction detected (PLIP)MG.59: 1 residues within 4Å:- Chain C: C.836
No protein-ligand interaction detected (PLIP)MG.60: 2 residues within 4Å:- Chain C: U.1513, A.3174
No protein-ligand interaction detected (PLIP)MG.61: 1 residues within 4Å:- Chain C: G.1521
No protein-ligand interaction detected (PLIP)MG.62: 2 residues within 4Å:- Chain C: C.850, G.933
No protein-ligand interaction detected (PLIP)MG.63: 1 residues within 4Å:- Chain C: A.1963
No protein-ligand interaction detected (PLIP)MG.64: 3 residues within 4Å:- Chain 1: T.111
- Chain C: A.1558, U.1889
No protein-ligand interaction detected (PLIP)MG.65: 2 residues within 4Å:- Chain C: C.895, C.925
No protein-ligand interaction detected (PLIP)MG.66: 3 residues within 4Å:- Chain C: U.903, U.2229, A.2230
No protein-ligand interaction detected (PLIP)MG.67: 2 residues within 4Å:- Chain C: U.906, G.907
No protein-ligand interaction detected (PLIP)MG.68: 3 residues within 4Å:- Chain C: G.907, U.3044
- Chain G: K.241
No protein-ligand interaction detected (PLIP)MG.69: 3 residues within 4Å:- Chain C: A.1640, A.1890, C.1891
No protein-ligand interaction detected (PLIP)MG.70: 5 residues within 4Å:- Chain C: A.1638, U.1639, A.1640, A.1890, C.1891
No protein-ligand interaction detected (PLIP)MG.71: 5 residues within 4Å:- Chain C: U.1482, A.1483, U.2437, A.2478
- Ligands: MG.16
No protein-ligand interaction detected (PLIP)MG.72: 2 residues within 4Å:- Chain C: G.2464, A.2485
No protein-ligand interaction detected (PLIP)MG.73: 2 residues within 4Å:- Chain C: G.660, C.2467
No protein-ligand interaction detected (PLIP)MG.74: 4 residues within 4Å:- Chain C: A.685, G.1463, U.1464, G.1465
No protein-ligand interaction detected (PLIP)MG.75: 2 residues within 4Å:- Chain C: G.353
- Chain H: G.99
No protein-ligand interaction detected (PLIP)MG.76: 1 residues within 4Å:- Chain C: G.677
No protein-ligand interaction detected (PLIP)MG.77: 2 residues within 4Å:- Chain C: C.666, U.974
No protein-ligand interaction detected (PLIP)MG.78: 3 residues within 4Å:- Chain C: A.1469, U.1470, C.1471
No protein-ligand interaction detected (PLIP)MG.79: 2 residues within 4Å:- Chain C: U.974, G.1468
No protein-ligand interaction detected (PLIP)MG.80: 5 residues within 4Å:- Chain C: G.2911, A.2912, U.2961, C.2962, U.2963
No protein-ligand interaction detected (PLIP)MG.81: 4 residues within 4Å:- Chain C: G.669, A.2912, U.2963, U.2964
No protein-ligand interaction detected (PLIP)MG.82: 1 residues within 4Å:- Chain C: C.2234
No protein-ligand interaction detected (PLIP)MG.83: 1 residues within 4Å:- Chain C: C.2220
No protein-ligand interaction detected (PLIP)MG.84: 3 residues within 4Å:- Chain C: C.893, U.894, C.925
No protein-ligand interaction detected (PLIP)MG.85: 2 residues within 4Å:- Chain C: A.2276, U.2277
No protein-ligand interaction detected (PLIP)MG.86: 3 residues within 4Å:- Chain C: U.2281, A.2400, A.2401
No protein-ligand interaction detected (PLIP)MG.87: 1 residues within 4Å:- Chain C: A.2367
No protein-ligand interaction detected (PLIP)MG.88: 3 residues within 4Å:- Chain C: A.1951, G.1954, G.2423
No protein-ligand interaction detected (PLIP)MG.89: 3 residues within 4Å:- Chain C: A.3145, A.3183
- Chain G: K.364
1 PLIP interactions:1 interactions with chain G- Metal complexes: G:K.364
MG.90: 4 residues within 4Å:- Chain 8: D.36
- Chain C: U.665, A.670, A.674
1 PLIP interactions:1 interactions with chain 8- Metal complexes: 8:D.36
MG.91: 3 residues within 4Å:- Chain C: G.1026, U.1027, U.1082
No protein-ligand interaction detected (PLIP)MG.92: 4 residues within 4Å:- Chain C: C.990, C.2893, A.2894, G.2895
No protein-ligand interaction detected (PLIP)MG.93: 1 residues within 4Å:- Chain C: G.669
No protein-ligand interaction detected (PLIP)MG.94: 1 residues within 4Å:- Chain D: G.89
No protein-ligand interaction detected (PLIP)MG.95: 1 residues within 4Å:- Chain D: U.87
No protein-ligand interaction detected (PLIP)MG.96: 2 residues within 4Å:- Chain E: C.27, U.28
No protein-ligand interaction detected (PLIP)MG.97: 2 residues within 4Å:- Chain T: Y.130, R.131
1 PLIP interactions:1 interactions with chain T- Metal complexes: T:Y.130
MG.98: 1 residues within 4Å:- Chain Z: N.49
No protein-ligand interaction detected (PLIP)MG.99: 3 residues within 4Å:- Chain 8: R.10, T.11
- Chain C: G.1440
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gemin, O. et al., Ribosomes hibernate on mitochondria during cellular stress. Nat Commun (2024)
- Release Date
- 2024-10-16
- Peptides
- Large ribosomal subunit protein eL42: A
Large ribosomal subunit protein eL43A: B
Large ribosomal subunit protein uL2C: F
Large ribosomal subunit protein uL3A: G
Large ribosomal subunit protein uL4A: H
Large ribosomal subunit protein uL18B: I
Large ribosomal subunit protein eL6: J
Large ribosomal subunit protein uL30C: K
Large ribosomal subunit protein eL8: L
Large ribosomal subunit protein uL6B: M
Large ribosomal subunit protein uL16A: N
Large ribosomal subunit protein uL5A: O
Large ribosomal subunit protein eL13: P
Large ribosomal subunit protein eL14: Q
Large ribosomal subunit protein eL15B: R
Large ribosomal subunit protein uL13A: S
Large ribosomal subunit protein uL22A: T
Large ribosomal subunit protein eL18B: U
Large ribosomal subunit protein eL19B: V
Large ribosomal subunit protein eL20A: W
Large ribosomal subunit protein eL21B: X
Large ribosomal subunit protein eL22: Y
Large ribosomal subunit protein uL14B: Z
Large ribosomal subunit protein eL24B: 0
Large ribosomal subunit protein uL23A: 1
Large ribosomal subunit protein uL24: 2
Large ribosomal subunit protein eL27A: 3
Large ribosomal subunit protein uL15B: 4
Large ribosomal subunit protein eL29: 5
Large ribosomal subunit protein eL30A: 6
Large ribosomal subunit protein eL31: 7
Large ribosomal subunit protein eL32A: 8
Large ribosomal subunit protein eL33A: 9
Large ribosomal subunit protein eL34B: a
Large ribosomal subunit protein uL29: b
Large ribosomal subunit protein eL36B: c
Large ribosomal subunit protein eL37B: d
Large ribosomal subunit protein eL38A: e
Large ribosomal subunit protein eL39: f
Large ribosomal subunit protein eL28: g - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
0B
1F
NG
OH
PI
QJ
RK
SL
TM
UN
VO
WP
XQ
YR
ZS
aT
bU
cV
dW
eX
fY
gZ
h0
i1
j2
k3
l4
m5
n6
o7
p8
q9
ra
sb
tc
ud
ve
wf
xg
y
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 3 x ZN: ZINC ION(Non-covalent)
- 97 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gemin, O. et al., Ribosomes hibernate on mitochondria during cellular stress. Nat Commun (2024)
- Release Date
- 2024-10-16
- Peptides
- Large ribosomal subunit protein eL42: A
Large ribosomal subunit protein eL43A: B
Large ribosomal subunit protein uL2C: F
Large ribosomal subunit protein uL3A: G
Large ribosomal subunit protein uL4A: H
Large ribosomal subunit protein uL18B: I
Large ribosomal subunit protein eL6: J
Large ribosomal subunit protein uL30C: K
Large ribosomal subunit protein eL8: L
Large ribosomal subunit protein uL6B: M
Large ribosomal subunit protein uL16A: N
Large ribosomal subunit protein uL5A: O
Large ribosomal subunit protein eL13: P
Large ribosomal subunit protein eL14: Q
Large ribosomal subunit protein eL15B: R
Large ribosomal subunit protein uL13A: S
Large ribosomal subunit protein uL22A: T
Large ribosomal subunit protein eL18B: U
Large ribosomal subunit protein eL19B: V
Large ribosomal subunit protein eL20A: W
Large ribosomal subunit protein eL21B: X
Large ribosomal subunit protein eL22: Y
Large ribosomal subunit protein uL14B: Z
Large ribosomal subunit protein eL24B: 0
Large ribosomal subunit protein uL23A: 1
Large ribosomal subunit protein uL24: 2
Large ribosomal subunit protein eL27A: 3
Large ribosomal subunit protein uL15B: 4
Large ribosomal subunit protein eL29: 5
Large ribosomal subunit protein eL30A: 6
Large ribosomal subunit protein eL31: 7
Large ribosomal subunit protein eL32A: 8
Large ribosomal subunit protein eL33A: 9
Large ribosomal subunit protein eL34B: a
Large ribosomal subunit protein uL29: b
Large ribosomal subunit protein eL36B: c
Large ribosomal subunit protein eL37B: d
Large ribosomal subunit protein eL38A: e
Large ribosomal subunit protein eL39: f
Large ribosomal subunit protein eL28: g - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
0B
1F
NG
OH
PI
QJ
RK
SL
TM
UN
VO
WP
XQ
YR
ZS
aT
bU
cV
dW
eX
fY
gZ
h0
i1
j2
k3
l4
m5
n6
o7
p8
q9
ra
sb
tc
ud
ve
wf
xg
y