SMTL ID : 9bru.1

Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-3-3-1-1-1-1-1-1-9-1-1-1-1-3-3-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Wang, C. et al., Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature (2024)

Release Date

2024-06-19

Peptides

V-type proton ATPase subunit D: A
V-type proton ATPase subunit E 1: BCD
V-type proton ATPase subunit G 2: EFG
V-type proton ATPase subunit C 1: H
V-type proton ATPase subunit H: I
V-type proton ATPase 116 kDa subunit a 1: J
V-type proton ATPase subunit e 2: K
Ribonuclease kappa: L
V-type proton ATPase 21 kDa proteolipid subunit c'': M
V-type proton ATPase 16 kDa proteolipid subunit c: NOPQRSTUV
V-type proton ATPase subunit F: W
V-type proton ATPase subunit d 1: X
V-type proton ATPase subunit S1: Y
Renin receptor cytoplasmic fragment: Z
V-type proton ATPase catalytic subunit A: 012
V-type proton ATPase subunit B, brain isoform: 345

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
7

B
8

C
9

D
Q

E
R

F
T

G
V

H
6

I
U

J
a

K
e

L
f

M
b

N
g

O
h

P
i

Q
j

R
k

S
l

T
m

U
n

V
o

W
X

X
d

Y
c

Z
p

0
1

1
0

2
2

3
3

4
4

5
5

Membrane

We predict this structure to be a membrane protein.
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V-type proton ATPase subunit D

V-type proton ATPase subunit E 1

V-type proton ATPase subunit G 2

V-type proton ATPase subunit C 1

V-type proton ATPase subunit H

V-type proton ATPase 116 kDa subunit a 1

V-type proton ATPase subunit e 2

Ribonuclease kappa

V-type proton ATPase 21 kDa proteolipid subunit c''

V-type proton ATPase 16 kDa proteolipid subunit c

V-type proton ATPase subunit F

V-type proton ATPase subunit d 1

V-type proton ATPase subunit S1

Renin receptor cytoplasmic fragment

V-type proton ATPase catalytic subunit A

V-type proton ATPase subunit B, brain isoform

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