SMTL ID : 9grs.3 (2 other biounits)

Crystal structure of HRP-2 PWWP domain in complex with compound 8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 5 residues within 4Å: Chain A: Y.19, W.22, F.45, T.48, E.50 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.48 pi-Cation interactions: A:Y.19, A:W.22, A:W.22, A:F.45

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Y.19, R.75, K.76 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.76 Salt bridges: A:R.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vantieghem, T. et al., Rational fragment-based design of compounds targeting the PWWP domain of the HRP family. Eur.J.Med.Chem. (2024)

Release Date

2024-11-06

Peptides

Hepatoma-derived growth factor-related protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Hepatoma-derived growth factor-related protein 2

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