SMTL ID : 9h2b.2 (1 other biounit)

AcMNPV basal cap - C14 anchor complex only

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-1-1-4-3-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain G: C.18, C.36, S.37, C.49, H.52 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:C.18, G:C.36, G:C.49, G:H.52 ZN.2: 4 residues within 4Å: Chain H: C.18, C.36, C.49, H.52 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:C.18, H:C.36, H:C.49, H:H.52 ZN.3: 6 residues within 4Å: Chain M: C.18, P.35, C.36, S.37, C.49, H.52 4 PLIP interactions: 4 interactions with chain M Metal complexes: M:C.18, M:C.36, M:C.49, M:H.52 ZN.4: 4 residues within 4Å: Chain N: C.18, C.36, C.49, H.52 4 PLIP interactions: 4 interactions with chain N Metal complexes: N:C.18, N:C.36, N:C.49, N:H.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Effantin, G. et al., Structure of AcMNPV nucleocapsid reveals DNA portal organization and packaging apparatus of circular dsDNA baculovirus. Nat Commun (2025)

Release Date

2025-06-04

Peptides

Occlusion-derived virus envelope protein E27: AB
Protein C42: CD
Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region: E
Protein AC142: F
Major capsid protein: GHMN
Capsid-associated protein VP80: IJK
Protein AC109: L

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

M
M

N
N

I
I

J
J

K
K

L
L

Occlusion-derived virus envelope protein E27

Protein C42

Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region

Protein AC142

Major capsid protein

Capsid-associated protein VP80

Protein AC109

Related Entries With Identical Sequence