SMTL ID : 9h2j.1

AcMNPV apical cap - C14 anchor complex only

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-1-4-3-1-2-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain F: C.18, F.20, A.21, C.36, C.49, H.52 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.18, F:F.20, F:C.36, F:H.52 ZN.2: 5 residues within 4Å: Chain G: C.18, F.20, C.36, C.49, H.52 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:C.18, G:F.20, G:C.36, G:H.52, G:H.52 ZN.3: 4 residues within 4Å: Chain M: C.18, C.36, C.49, H.52 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:C.18, M:C.36, M:C.49, M:H.52, M:H.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Effantin, G. et al., Structure of AcMNPV nucleocapsid reveals DNA portal organization and packaging apparatus of circular dsDNA baculovirus. Nat Commun (2025)

Release Date

2025-06-04

Peptides

Occlusion-derived virus envelope protein E27: AB
Protein C42: CD
Protein AC142: E
Major capsid protein: FGLM
Capsid-associated protein VP80: HIJ
Protein AC109: K
Protein Ac66: NP
Tyrosine-protein phosphatase: O

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

L
L

M
M

H
H

I
I

J
J

K
K

N
N

P
P

O
O

Occlusion-derived virus envelope protein E27

Protein C42

Protein AC142

Major capsid protein

Capsid-associated protein VP80

Protein AC109

Protein Ac66

Tyrosine-protein phosphatase

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