SMTL ID : 9qac.2 (2 other biounits)

Crystal structure of the SMARCA2 bromodomain bound to a fragment screening hit

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x 01: methyl 2-azanyl-1~{H}-indole-3-carboxylate

01.1: 13 residues within 4Å: Chain A: V.38, F.39, Q.41, L.42, P.43, L.48, Y.51, V.59, L.86, A.90, F.93, N.94, I.100 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.51, A:L.86 Hydrogen bonds: A:N.94 pi-Stacking: A:F.39

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 1 residues within 4Å: Chain A: H.88 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.88, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schimpl, M., Discovery of Pyrimidoindolones as Novel Family VIII Bromo-domain Binders. ACS Medicinal Chemistry Letters (2025)

Release Date

2025-06-18

Peptides

Probable global transcription activator SNF2L2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Probable global transcription activator SNF2L2

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