Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) interactions

Interactions downloaded from IntAct. Only interactions between SARS-CoV-2 and the human host proteins are shown.

Host translation inhibitor nsp1 (25 interactions)
Non-structural protein 2 (nsp2) (25 interactions)
Non-structural protein 3 (nsp3) (31 interactions)
Non-structural protein 4 (nsp4) (58 interactions)
UniProtKB AC
(Name)		UniProtKB Section
 
Homology Model
 
Experimental Structure 		OrganismDescriptionReferences
O00238
(BMR1B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Bone morphogenetic protein receptor type-1B;EBI-25686038
O00567
(NOP56_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Nucleolar protein 56;
Nucleolar protein 5A;		EBI-25509501
O15226
(NKRF_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		NF-kappa-B-repressing factor;
Protein ITBA4;		EBI-25509501
O15381
(NVL_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Nuclear valosin-containing protein-like;EBI-25509501
O43395
(PRPF3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		U4/U6 small nuclear ribonucleoprotein Prp3;
Pre-mRNA-splicing factor 3;
U4/U6 snRNP 90 kDa protein;		EBI-25509501
O43660
(PLRG1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Pleiotropic regulator 1;EBI-25509501
O75354
(ENTP6_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Ectonucleoside triphosphate diphosphohydrolase 6;
CD39 antigen-like 2;		EBI-25686038
O95104
(SCAF4_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		SR-related and CTD-associated factor 4;
CTD-binding SR-like protein RA4;
Splicing factor, arginine/serine-rich 15;		EBI-25509501
P05023
(AT1A1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Sodium/potassium-transporting ATPase subunit alpha-1;
Sodium pump subunit alpha-1;		EBI-25509501
P09012
(SNRPA_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		U1 small nuclear ribonucleoprotein A;EBI-25509501
P10321
(HLAC_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		HLA class I histocompatibility antigen, C alpha chain;
HLA-Cw;
Human leukocyte antigen C;		EBI-25686038
P11021
(BIP_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Endoplasmic reticulum chaperone BiP;
78 kDa glucose-regulated protein;
Binding-immunoglobulin protein;
Heat shock protein 70 family protein 5;
Heat shock protein family A member 5;
Immunoglobulin heavy chain-binding protein;		EBI-25686038
P11387
(TOP1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		DNA topoisomerase 1;
DNA topoisomerase I;		EBI-25509501
P14735
(IDE_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Insulin-degrading enzyme;
Abeta-degrading protease;
Insulin protease;
Insulysin;		EBI-25490940
P16615
(AT2A2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;
Calcium pump 2;
Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform;
Endoplasmic reticulum class 1/2 Ca(2+) ATPase;		EBI-25509501
P16989
(YBOX3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Y-box-binding protein 3;
Cold shock domain-containing protein A;
DNA-binding protein A;
Single-strand DNA-binding protein NF-GMB;		EBI-25509501
P25398
(RS12_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Small ribosomal subunit protein eS12;
40S ribosomal protein S12;		EBI-25509501
P26599
(PTBP1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Polypyrimidine tract-binding protein 1;
57 kDa RNA-binding protein PPTB-1;
Heterogeneous nuclear ribonucleoprotein I;		EBI-25509501
P35250
(RFC2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Replication factor C subunit 2;
Activator 1 40 kDa subunit;
Activator 1 subunit 2;
Replication factor C 40 kDa subunit;		EBI-25509501
P35251
(RFC1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Replication factor C subunit 1;
Activator 1 140 kDa subunit;
Activator 1 large subunit;
Activator 1 subunit 1;
DNA-binding protein PO-GA;
Replication factor C 140 kDa subunit;
Replication factor C large subunit;		EBI-25509501
P40938
(RFC3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Replication factor C subunit 3;
Activator 1 38 kDa subunit;
Activator 1 subunit 3;
Replication factor C 38 kDa subunit;		EBI-25509501
P42696
(RBM34_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein 34;
RNA-binding motif protein 34;		EBI-25509501
P46013
(KI67_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Proliferation marker protein Ki-67;
Antigen identified by monoclonal antibody Ki-67;		EBI-25509501
P46782
(RS5_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Small ribosomal subunit protein uS7;
40S ribosomal protein S5;		EBI-25509501
P51690
(ARSL_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Arylsulfatase L;
Arylsulfatase E;		EBI-25686038
P62072
(TIM10_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Mitochondrial import inner membrane translocase subunit Tim10;EBI-25490940
P82650
(RT22_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Small ribosomal subunit protein mS22;
28S ribosomal protein S22, mitochondrial;		EBI-25509501
Q12788
(TBL3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Transducin beta-like protein 3;
WD repeat-containing protein SAZD;		EBI-25509501
Q13523
(PRP4K_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Serine/threonine-protein kinase PRP4 homolog;
PRP4 kinase;
PRP4 pre-mRNA-processing factor 4 homolog;		EBI-25509501
Q13610
(PWP1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Periodic tryptophan protein 1 homolog;
Keratinocyte protein IEF SSP 9502;		EBI-25509501
Q14498
(RBM39_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein 39;
CAPER alpha;
Hepatocellular carcinoma protein 1;
RNA-binding motif protein 39;
RNA-binding region-containing protein 2;
Splicing factor HCC1;		EBI-25509501
Q16658
(FSCN1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Fascin;
55 kDa actin-bundling protein;
Singed-like protein;
p55;		EBI-25686038
Q2TAA5
(ALG11_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase;
Asparagine-linked glycosylation protein 11 homolog;
Glycolipid 2-alpha-mannosyltransferase;		EBI-25490940
Q30201
(HFE_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Hereditary hemochromatosis protein;
HLA-H;		EBI-25686038
Q6NUS6
(TECT3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Tectonic-3;EBI-25686038
Q7Z2T5
(TRM1L_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		TRMT1-like protein;EBI-25509501
Q86UE4
(LYRIC_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Protein LYRIC;
3D3/LYRIC;
Astrocyte elevated gene-1 protein;
Lysine-rich CEACAM1 co-isolated protein;
Metadherin;
Metastasis adhesion protein;		EBI-25509501
Q8N5C6
(SRBD1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		S1 RNA-binding domain-containing protein 1;EBI-25509501
Q8TEM1
(PO210_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Nuclear pore membrane glycoprotein 210;
Nuclear envelope pore membrane protein POM 210;
Nucleoporin Nup210;
Pore membrane protein of 210 kDa;		EBI-25490940
Q92615
(LAR4B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		La-related protein 4B;
La ribonucleoprotein domain family member 4B;
La ribonucleoprotein domain family member 5;
La-related protein 5;		EBI-25509501
Q92820
(GGH_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Gamma-glutamyl hydrolase;
Conjugase;
GH;
Gamma-Glu-X carboxypeptidase;		EBI-25686038
Q969N2
(PIGT_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		GPI transamidase component PIG-T;
Phosphatidylinositol-glycan biosynthesis class T protein;		EBI-25686038
Q9BSF4
(TIM29_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Mitochondrial import inner membrane translocase subunit Tim29;EBI-25490940
Q9GZR7
(DDX24_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		ATP-dependent RNA helicase DDX24;
DEAD box protein 24;		EBI-25509501
Q9H0A0
(NAT10_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA cytidine acetyltransferase;
18S rRNA cytosine acetyltransferase;
N-acetyltransferase 10;
N-acetyltransferase-like protein;		EBI-25509501
Q9H5H4
(ZN768_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Zinc finger protein 768;EBI-25509501
Q9HC36
(MRM3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		rRNA methyltransferase 3, mitochondrial;
16S rRNA (guanosine(1370)-2'-O)-methyltransferase;
16S rRNA [Gm1370] 2'-O-methyltransferase;
RNA methyltransferase-like protein 1;		EBI-25509501
Q9NVH1
(DJC11_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		DnaJ homolog subfamily C member 11;EBI-25490940
Q9NW13
(RBM28_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein 28;
RNA-binding motif protein 28;		EBI-25509501
Q9NX58
(LYAR_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Cell growth-regulating nucleolar protein;EBI-25509501
Q9NXF1
(TEX10_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Testis-expressed protein 10;EBI-25509501
Q9P035
(HACD3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3;
3-hydroxyacyl-CoA dehydratase 3;
Butyrate-induced protein 1;
Protein-tyrosine phosphatase-like A domain-containing protein 1;		EBI-25509501
Q9UHN6
(CEIP2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Cell surface hyaluronidase CEMIP2;
Cell migration-inducing hyaluronidase 2;
Transmembrane protein 2;		EBI-25686038
Q9UHX1
(PUF60_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Poly(U)-binding-splicing factor PUF60;
60 kDa poly(U)-binding-splicing factor;
FUSE-binding protein-interacting repressor;
Ro-binding protein 1;
Siah-binding protein 1;		EBI-25509501
Q9UJV9
(DDX41_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Probable ATP-dependent RNA helicase DDX41;
DEAD box protein 41;
DEAD box protein abstrakt homolog;		EBI-25509501
Q9UKD2
(MRT4_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		mRNA turnover protein 4 homolog;
Ribosome assembly factor MRTO4;		EBI-25509501
Q9Y5J6
(T10B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Mitochondrial import inner membrane translocase subunit Tim10 B;
Fracture callus protein 1;
FxC1;
Mitochondrial import inner membrane translocase subunit Tim9 B;
TIMM10B;		EBI-25490940
Q9Y5J7
(TIM9_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Mitochondrial import inner membrane translocase subunit Tim9;EBI-25490940
3C-like proteinase (3CL-PRO) (8 interactions)
Non-structural protein 6 (nsp6) (83 interactions)
Non-structural protein 7 (nsp7) (44 interactions)
Non-structural protein 8 (nsp8) (56 interactions)
Non-structural protein 9 (nsp9) (24 interactions)
Non-structural protein 10 (nsp10) (33 interactions)
Non-structural protein 11 (4 interactions)
RNA-directed RNA polymerase (Pol) (38 interactions)
Helicase (Hel) (67 interactions)
Proofreading exoribonuclease (ExoN) (26 interactions)
Uridylate-specific endoribonuclease (56 interactions)
2'-O-methyltransferase (3 interactions)
Spike glycoprotein (S glycoprotein) (29 interactions)
ORF3a protein (ORF3a) (365 interactions)
Protein 3b (1 interactions)
Envelope small membrane protein (E) (14 interactions)
Membrane protein (M) (216 interactions)
ORF6 protein (ORF6) (20 interactions)
ORF7a protein (ORF7a) (100 interactions)
ORF7b protein (ORF7b) (409 interactions)
ORF8 protein (ORF8) (116 interactions)
Nucleoprotein (N) (30 interactions)
ORF9b protein (ORF9b) (34 interactions)
Uncharacterized protein 14 (ORF14) (86 interactions)
ORF10 protein (29 interactions)