A0A6P5DPM5 (A0A6P5DPM5_BOSIN) Bos indicus (Zebu)
Rhodopsin UniProtKBInterProInteractive Modelling
348 aa; Sequence (Fasta) ;
2 identical sequences: Bos taurus: P02699; Bos indicus x Bos taurus: A0A4W2GU91
Available Structures
75 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Rhodopsin-Gi protein complex |
Heteromer P02698; P02699; P62871; P63096; | 99.1 | 1×NAG; 1×RET; | |||
| Crystal structure of active conformation of GPCR opsin stabilized by octylglucoside |
Heteromer P02699; P04695; | 100 | 1×NAG; 1×GLC; 4×BOG; 1×PLM; 2×SO4; 1×ACT; | |||
| Crystal Structure of T94I rhodopsin mutant |
Heteromer P02699; P0C7Q4; | 99.08 | 1×NAG; 1×RET; 2×ACT; 2×BOG; 2×PLM; 1×SO4; | |||
| Crystal structure of Metarhodopsin II in complex with a C-terminal peptide derived from the Galpha … |
Heteromer P02699; P04695; | 100 | 1×NAG; 1×GLC; 1×RET; 1×NAG; 2×BOG; 1×PLM; 1×SO4; 2×ACT; | |||
| Night blindness causing G90D rhodopsin in complex with GaCT2 peptide |
Heteromer P02699; P04695; | 99.08 | 1×NAG; 1×SO4; 1×ACT; 1×PLM; 1×BOG; | |||
| Crystal structure of bovine opsin with nerol bound |
Heteromer P02699; P04696; | 100 | 1×NAG; 1×BOG; 1×PLM; 1×NZZ; | |||
| Crystal structure of bovine opsin with geraniol bound |
Heteromer P02699; P04696; | 100 | 1×NAG; 1×BOG; 1×PLM; 1×64Z; | |||
| CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,D2C,D282C RHODOPSIN MUTANT WITH BOUND GALPHACT… |
Heteromer P02699; P04695; | 99.08 | 2×NAG; 2×PEF; 2×BOG; 4×PLM; 2×RET; 2×LPP; 2×ACT; | |||
| Crystal structure of the active G-protein-coupled receptor opsin in complex with a C-terminal pepti… |
Heteromer P02699; P04695; | 100 | 1×NAG; 1×NAG; 3×BOG; 2×PLM; | |||
| Crystal structure of the light-activated constitutively active N2C, M257Y,D282C rhodopsin mutant in… |
Heteromer P02699; P04695; | 99.08 | 2×NAG; 2×RET; 2×ACT; 2×BOG; 2×PLM; | |||
| Structure of the Rhodopsin-Transducin-Nanobody Complex |
Heteromer P02698; P02699; P04695; P62871; | 100 | 1×RET; | |||
| Structure of the Rhodopsin-Transducin Complex |
Heteromer P02698; P02699; P04695; P62871; | 100 | 1×RET; | |||
| Crystal structure of the active G-protein-coupled receptor opsin in complex with the finger-loop pe… |
Heteromer P02699; P08168; | 100 | 2×NAG; 2×GLC; 6×BOG; 2×PLM; 2×SO4; 2×ACT; | |||
| Rhodopsin kinase (GRK1) in complex with rhodopsin |
Heteromer P02699; P28327; | 100 | 1×SGV; 1×RET; | |||
| Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin and Fab6 |
Heteromer P02699; P28327; | 100 | 1×SGV; 1×RET; | |||
| Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin |
Heteromer P02699; P28327; | 100 | 1×SGV; 1×RET; | |||
| Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin and Fab1 |
Heteromer P02699; P28327; | 100 | 1×SGV; 1×RET; | |||
| Crystal structure of ground-state rhodopsin in complex with a nanobody |
Heteromer P02699; | 100.0 | 1×NAG; 1×NAG; 1×NAG; 1×NAG; 2×RET; | |||
| Crystal structure of bovine rod opsin in complex with a nanobody |
Heteromer P02699; | 100.0 | 1×NAG; 1×NAG; 1×NAG; 1×NAG; | |||
| Crystal structure of photoactivated rhodopsin in complex with a nanobody |
Heteromer P02699; | 100.0 | 1×NAG; 1×NAG; 1×NAG; 1×NAG; | |||
| Cryo-EM structure of Rhodopsin-Gi bound with antibody fragments scFv16 and Fab79, conformation 2 |
Heteromer P02698; P02699; P62871; P63096; | 99.06 | ||||
| Cryo-EM structure of Rhodopsin-Gi bound to antibody fragment Fab13 |
Heteromer P02698; P02699; P62871; P63096; | 99.05 | ||||
| Crystal structure of the rhodopsin-mini-Go complex |
Heteromer P02699; P09471; | 99.05 | 1×RET; 1×NAG; | |||
| Cryo-EM structure of Rhodopsin-Gi bound with antibody fragments scFv16 and Fab79, conformation 1 |
Heteromer P02698; P02699; P62871; P63096; | 99.05 | ||||
| Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6… |
Heteromer A0A087WNH4; A0A8C0T6I4; A0A8I3PRN4; A0A8I3PXW2; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TJR3; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1U001; G1U7L1; P02699; P0DXC2; P16967; P19949; P23438; P24643; P38377; P60058; P60467; U3KPD5; | 100 | 218×MG; 5×ZN; | |||
| Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6… |
Heteromer A0A087WNH4; A0A8C0T6I4; A0A8I3PRN4; A0A8I3PXW2; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1TYL6; G1U001; G1U7L1; P02699; P0DXC2; P16967; P19949; P23438; P24643; P38377; P60058; P60467; U3KPD5; | 100 | 218×MG; 5×ZN; | |||
| Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6… |
Heteromer A0A087WNH4; A0A8I3PRN4; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TJR3; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1U001; G1U7L1; P02699; P0DXC2; P19949; P38377; P60058; P60467; U3KPD5; | 100 | 218×MG; 5×ZN; | |||
| Crystallographic model of bathorhodopsin | homo-2-mer | 100 | 1×NAG; 2×NAG; 1×NAG; 6×HG; 7×ZN; 2×RET; 6×PLM; 4×HTG; 1×HTO; | |||
| Crystallographic model of lumirhodopsin | homo-2-mer | 100 | 1×NAG; 2×NAG; 1×NAG; 6×HG; 7×ZN; 2×RET; 6×PLM; 4×HTG; 1×HTO; | |||
| CRYSTAL STRUCTURE OF BOVINE RHODOPSIN | homo-2-mer | 100.0 | 3×NAG; 1×NAG; 6×HG; 4×ZN; 2×RET; | |||
| Crystallographic model of 9-cis-rhodopsin | homo-2-mer | 100 | 1×NAG; 2×NAG; 1×NAG; 6×HG; 7×ZN; 2×RET; 6×PLM; 4×HTG; 1×HTO; | |||
| Structure of Bovine Rhodopsin in a Trigonal Crystal Form | homo-2-mer | 100.0 | 4×NAG; 2×RET; 4×PLM; 2×PEF; 3×LDA; 12×C8E; 2×ZN; | |||
| Crystal structure of a rhodopsin stabilizing mutant expressed in mammalian cells | homo-2-mer | 99.39 | 2×RET; 2×NAG; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS06 | homo-2-mer | 99.39 | 2×NAG; 2×PLM; 10×BOG; 2×DO5; | |||
| Crystal Structure of Native Opsin: the G Protein-Coupled Receptor Rhodopsin in its Ligand-free State | homo-2-mer | 100 | 2×NAG; 2×NAG; 6×BGL; 2×PLM; | |||
| Crystal structure of Metarhodopsin II | homo-2-mer | 100 | 2×NAG; 2×NAG; 4×BOG; 2×PLM; 2×RET; | |||
| Night blindness causing G90D rhodopsin in the active conformation | homo-2-mer | 99.08 | 2×NAG; 2×ACT; 2×SO4; 2×PLM; 2×BOG; | |||
| Cryo-EM structure of the native rhodopsin dimer from rod photoreceptor cells | homo-2-mer | 100 | ||||
| 100 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA) | homo-2-mer | 100.0 | 2×NAG; 2×RET; 2×NAG; 1×DAO; 13×OLC; 2×PLM; | |||
| Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA) | homo-2-mer | 100.0 | 2×NAG; 2×ACE; 2×RET; 2×NAG; 1×DAO; 13×OLC; 2×PLM; | |||
| 1 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase | homo-2-mer | 100.0 | 2×NAG; 2×ACE; 2×RET; 2×NAG; 1×DAO; 13×OLC; 2×PLM; | |||
| Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SwissFEL) | homo-2-mer | 100.0 | 2×NAG; 2×ACE; 2×RET; 2×NAG; 1×DAO; 13×OLC; 2×PLM; | |||
| 10 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase | homo-2-mer | 100.0 | 2×NAG; 2×ACE; 2×RET; 2×NAG; 1×DAO; 13×OLC; 2×PLM; | |||
| Crystal Structure of Bovine Rhodopsin at 2.2 Angstroms Resolution | monomer | 100 | 1×NAG; 1×NAG; 3×HG; 4×ZN; 1×RET; 3×PLM; 1×HTG; | |||
| Crystal structure of bovine rhodopsin with beta-ionone | monomer | 100 | 1×NAG; 1×NAG; 1×RET; 2×PLM; 3×HG; 4×ZN; 1×4E6; 2×HTG; 1×ID3; | |||
| Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION | monomer | 100.0 | 1×NAG; 1×NAG; 5×BNG; 3×HG; 4×ZN; 4×HTO; 3×PLM; 1×RET; | |||
| CRYSTAL STRUCTURE OF BOVINE RHODOPSIN | monomer | 100.0 | 1×NAG; 1×NAG; 5×BNG; 3×HG; 4×ZN; 2×PLM; 1×RET; 4×HTO; | |||
| Crystal structure of Bos taurus opsin regenerated with 6-carbon ring retinal chromophore | monomer | 100 | 1×7AB; | |||
| Structure of ground-state bovine rhodospin in a hexagonal crystal form | monomer | 100.0 | 2×NAG; 1×ZN; 1×ACE; 1×RET; 2×PLM; 1×PEF; 1×LDA; 6×C8E; | |||
| Crystal structure of rhombohedral crystal form of ground-state rhodopsin | monomer | 100.0 | 1×NAG; 1×NAG; 1×RET; 2×PLM; | |||
| Crystal structure of a photoactivated rhodopsin | monomer | 100.0 | 1×NAG; 1×NAG; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS13 | monomer | 99.39 | 1×PLM; 2×NAG; 1×BMA; 2×MAN; 5×BOG; 1×DLH; | |||
| Structure of a mutant bovine rhodopsin in hexagonal crystal form | monomer | 99.39 | 1×NAG; 1×ACE; 1×RET; | |||
| Opsin/G(alpha) peptide complex stabilized by nonyl-glucoside | monomer | 100 | 1×NAG; 1×NAG; 2×BNG; 2×PLM; | |||
| Crystal Structure of T94I rhodopsin mutant | monomer | 99.08 | 1×NAG; 1×RET; 2×ACT; 2×BOG; 2×PLM; 1×SO4; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS01 | monomer | 99.39 | 1×NAG; 1×PLM; 4×BOG; 1×DOK; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS15 | monomer | 99.39 | 1×NAG; 1×PLM; 1×DLB; 5×BOG; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS16 | monomer | 99.39 | 1×NAG; 1×PLM; 5×BOG; 1×DL2; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS09 | monomer | 99.39 | 1×NAG; 1×PLM; 4×BOG; 1×DNK; | |||
| Crystal structure of Bos taurus opsin at 2.7 Angstrom | monomer | 100 | 1×NAG; 3×BOG; 2×PLM; 2×SO4; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS11 | monomer | 99.39 | 1×NAG; 1×PLM; 5×BOG; 1×DN5; | |||
| Crystal structure of bovine opsin with beta octyl glucoside bound | monomer | 100 | 1×NAG; 5×BOG; 1×PLM; 3×SO4; | |||
| Crystal structure of N2C/D282C stabilized opsin bound to RS08 | monomer | 99.39 | 1×NAG; 1×PLM; 1×DNZ; 2×BOG; | |||
| 3.2-Angstrom In situ Mylar structure of bovine opsin at 100 K | monomer | 100 | 1×NAG; 1×GLC; 3×BOG; 1×SO4; | |||
| Crystal structure of trigonal crystal form of ground-state rhodopsin | monomer | 100 | 1×NAG; 1×NAG; 1×PLM; | |||
| Crystal structure of bovine opsin with citronellol bound | monomer | 100 | 1×NAG; 1×ODM; 1×BOG; 1×PLM; | |||
| STRUCTURE OF BOVINE RHODOPSIN (Metarhodopsin II) | monomer | 100 | 1×RET; | |||
| Structure of bovine rhodopsin (dark adapted) | monomer | 100 | 1×RET; | |||
| SOLUTION STRUCTURE OF AMINO TERMINUS OF BOVINE RHODOPSIN (RESIDUES 1-40) | monomer | 97.5 | ||||
| SOLUTION STRUCTURE OF 2ND INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 172-205) | monomer | 100 | ||||
| SOLUTION STRUCTURE OF INTRADISKAL LOOP 1 OF BOVINE RHODOPSIN (RHODOPSIN RESIDUES 92-123) | monomer | 100 | ||||
| SOLUTION STRUCTURE OF THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 268-293) | monomer | 100 | ||||
| HELIX 7 BOVINE RHODOPSIN | monomer | 100 | ||||
| NMR structures of phosphorylated carboxy terminus of bovine rhodopsin in arrestin-bound state | monomer | 100 | ||||
| ARRESTIN-BOUND NMR STRUCTURES OF THE PHOSPHORYLATED CARBOXY-TERMINAL DOMAIN OF RHODOPSIN, REFINED | monomer | 100 | ||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5te3.2.B | homo-2-mer | 0.79 | 6×BOG; 4×PLM; | 100.00 | ||