C7C422 (BLAN1_KLEPN) Klebsiella pneumoniae
Metallo-beta-lactamase type 2 UniProtKBInterProInteractive Modelling
270 aa; Sequence (Fasta) ;
256 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
134 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| NDM-1 Beta-Lactamase Exhibits Differential Active Site Sequence Requirements for the Hydrolysis of … | homo-3-mer | 98.7 | 6×ZN; 2×EDO; 1×NA; 1×GOL; 1×CL; | |||
| Crystal structure of metallo-beta-lactamse, NDM-1, in complex with hydrolyzed ampicillin | homo-2-mer | 100 | 4×ZN; 2×ZZ7; | |||
| Crystal Structure Of NDM-1 Metallo-beta-lactamase In Complex With Inhibitor NO9 | homo-2-mer | 100.0 | 6×ZN; 4×SO4; 2×NO9; | |||
| Crystal Structure Of NDM-1 Metallo-beta-lactamase In Complex With Inhibitor X2 | homo-2-mer | 100.0 | 6×ZN; 5×SO4; 2×E1C; | |||
| Crystal structure of NDM-1 in complex with hydrolyzed ampicillin - new refinement | homo-2-mer | 100 | 4×ZN; 2×ZZ7; 4×SO4; 1×CL; 3×EDO; | |||
| Structural and mechanistic insights into NDM-1 catalyzed hydrolysis of cephalosporins | homo-2-mer | 100 | 4×ZN; 2×3S3; | |||
| Crystal structure of NDM-1 in complex with hydrolyzed cefuroxime - new refinement | homo-2-mer | 100.0 | 4×ZN; 1×SO4; 2×3S0; 2×UNL; | |||
| Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed compound 1 | homo-2-mer | 100 | 4×ZN; 2×OL6; | |||
| Structural and mechanistic insights into NDM-1 catalyzed hydrolysis of cephalosporins | homo-2-mer | 100.0 | 4×ZN; 2×3S0; | |||
| Crystal Structure Of NDM-1 Metallo-beta-lactamase | homo-2-mer | 100 | 6×ZN; 3×SO4; | |||
| apo NDM-1 Crystal Structure | homo-2-mer | 100 | 4×ZN; | |||
| Crystal structure of the New Delhi metallo-beta-lactamase-1 adduct with a lysine-targeted affinity … | homo-2-mer | 100 | 6×ZN; 2×CA; 1×N9M; 1×N9J; | |||
| Crystal structure of NDM-1 at pH7.3 (HEPES) in complex with hydrolyzed ampicillin | monomer | 100 | 2×ZN; 1×ZZ7; | |||
| NDM1-inhibitor co-structure | monomer | 100 | 1×ACT; 1×CA; 2×ZN; 1×CD; 1×O0L; | |||
| Crystal structure of NDM-1 at pH5.5 (Bis-Tris) in complex with hydrolyzed ampicillin | monomer | 100 | 1×ZZ7; 2×ZN; 1×OH; | |||
| NDM1-inhibitor co-structure | monomer | 100 | 2×ZN; 1×CD; 1×NZR; | |||
| Crystal structure of NDM-1 at pH6.2 (Bis-Tris) in complex with hydrolyzed ampicillin | monomer | 100 | 2×ZN; 1×PEG; 1×ZZ7; 1×GOL; | |||
| Crystal structure of B1 NDM-1 MBL in complex with 2-amino-5-(2-(thiophen-2-yl)ethyl)thiazole-4-carb… | monomer | 100 | 2×ZN; 1×60J; | |||
| Crystal structure of NDM-1 bound to hydrolyzed oxacillin | monomer | 100 | 2×ZN; 1×0WO; | |||
| Crystal structure of NDM-1 bound to hydrolyzed methicillin | monomer | 100 | 1×0RM; 2×ZN; | |||
| Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b | monomer | 100 | 2×ZN; 1×QT2; 2×SO4; | |||
| Crystal structure of B1 NDM-1 MBL in complex with 2-amino-5-phenethylthiazole-4-carboxylic acid | monomer | 100 | 2×ZN; 1×5ZX; 3×GOL; | |||
| Crystal structure of NDM-1 at pH7.5 (Tris-HCl, (NH4)2SO4) in complex with hydrolyzed ampicillin | monomer | 100 | 2×ZN; 1×OH; 1×ZZ7; | |||
| Crystal structure of NDM-1 bound to hydrolyzed benzylpenicillin | monomer | 100 | 1×PNK; 3×ZN; | |||
| New Delhi Metallo-beta-Lactamase-1 1.05 A structure Complexed with Hydrolyzed Ampicillin | monomer | 100 | 1×ZZ7; 2×ZN; 4×EDO; | |||
| Crystal structure of NDM-1 at pH7.5 (Imidazole) with 2 molecules per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 1×IMD; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Ampic… | monomer | 99.58 | 1×ZZ7; 2×CD; 1×EDO; | |||
| Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin G | monomer | 100 | 2×ZN; 1×PNK; 1×K; | |||
| Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed ampicillin | monomer | 100 | 2×ZN; 1×ZZ7; 1×NA; | |||
| Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin V | monomer | 100 | 2×ZN; 1×JXF; | |||
| New Delhi Metallo-beta-Lactamase-1 Complexed with Mn from Klebsiella pneumoniae | monomer | 100 | 1×ZZ7; 3×MN; 1×EDO; 1×GOL; | |||
| Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine D-syn-1b | monomer | 100 | 2×ZN; 2×SO4; 1×QST; | |||
| Crystal structure of NDM-1 metallo-beta-lactamase in complex with Cd ions and a hydrolyzed beta-lac… | monomer | 100 | 4×CD; 1×CL; 1×UNL; 1×PG4; | |||
| Crystal structure of NDM-1 at pH8.0 (Tris) with 2 molecules per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; | |||
| Crystal structure of NDM-1 at pH7.5 (HEPES) with 2 molecules per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 2×GOL; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1 D223A mutant from Klebsiella pneumoniae | monomer | 99.58 | 2×EDO; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1 Mutant M67V Complexed with Hydrolyzed Penic… | monomer | 99.58 | 3×ZN; 1×PNM; 1×CL; | |||
| Crystal structure of NDM-1 at pH7.0 (HEPES) with 2 molecules per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 2×GOL; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1 A121F mutant from Klebsiella pneumoniae | monomer | 99.58 | 2×IMD; 1×P6G; 1×PEG; 2×GOL; | |||
| NDM-1 metallo-beta-lactamase: a parsimonious interpretation of the diffraction data | monomer | 100.0 | 2×ZN; 1×PG4; 1×CL; 1×P6G; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1, Complexed with Cd and Ampicillin | monomer | 100 | 1×ZZ7; 3×CD; 1×CL; | |||
| Crystal structure of NDM-1 with VNRX-5133 | monomer | 100.0 | 2×ZN; 3×SO4; 1×K9K; 1×K9B; | |||
| New Delhi Metallo-beta-Lactamase-1 Complexed with Cd | monomer | 99.14 | 3×CD; 2×GOL; 2×CL; | |||
| Approved Drugs Containing Thiols as Inhibitors of Metallo-beta- lactamases: Strategy To Combat Mult… | monomer | 100 | 2×ZN; 1×WJZ; | |||
| Crystal structure of NDM-1 in complex with benzobisheterocycle compound 14. | monomer | 100.0 | 1×Y4E; 2×ZN; 2×SO4; | |||
| Crystal structure of the metallo-beta-lactamase NDM-1 in complex with a bisthiazolidine inhibitor | monomer | 100.0 | 2×ZN; 1×3C7; | |||
| Crystal structure of NDM-1 beta-lactamase in complex with broad spectrum boronic inhibitor cpd3 | monomer | 100 | 2×ZN; 2×CA; 1×HCQ; | |||
| Crystal structure of NDM-1 beta-lactamase in complex with broad spectrum boronic inhibitor cpd 1 | monomer | 100.0 | 1×H9E; 2×ZN; 3×CA; | |||
| NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP56 | monomer | 100 | 2×ZN; 1×CA; 1×ORL; 1×EPE; 1×1PE; | |||
| NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP35 | monomer | 100 | 2×ZN; 2×CA; 1×OQU; 1×EDO; | |||
| NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP57 | monomer | 100 | 2×ZN; 2×CA; 1×EDO; 1×OQK; | |||
| Crystal structure of NDM-1 metallo-beta-lactamase harboring an insertion of a Pro residue in L3 loop | monomer | 100 | 1×ZN; 1×CD; 2×NI; 1×CO; 1×CA; 3×SO4; | |||
| Crystal Structure of the Mono-Zinc-boundform of New Delhi Metallo-beta-Lactamase-1 from Klebsiella … | monomer | 100 | 1×ZN; 1×CIT; 2×SO4; 1×GOL; | |||
| Crystal Structure of New Delhi Metal-beta-lactamase-1 from Klebsiella pneumoniae | monomer | 100 | 1×CIT; | |||
| Crystal Structure of New Delhi Metallo-beta-Lactamase-1 in the Complex with Hydrolyzed Meropenem | monomer | 100 | 2×ZN; 1×0RV; 1×ACY; 2×GOL; | |||
| Crystal structure of N-terminally truncated NDM-1 metallo-beta-lactamase | monomer | 100.0 | 2×ZN; 2×CA; 2×CL; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss04134 | monomer | 100 | 1×EG0; 3×EDO; 2×ZN; | |||
| Crystal structure of NDM-1 in complex with beta-mercaptoethanol - new refinement | monomer | 100 | 2×ZN; 1×BME; 2×GOL; | |||
| Crystal Structure of the New Deli Metallo Beta Lactamase Variant 5 from Klebsiella pneumoniae | monomer | 99.13 | 2×ZN; 1×K; | |||
| Crystal Structure of the New Deli Metallo Beta Lactamase Variant 4 from Klebsiella pneumoniae | monomer | 99.56 | 3×ZN; 4×FMT; | |||
| Crystal structure of NDM-1 in complex with hydrolyzed meropenem - new refinement | monomer | 100 | 1×8YL; 2×ZN; 2×GOL; 1×SO4; | |||
| New Delhi Metallo-beta-Lactamase-1, Complexed with Cd and Faropenem | monomer | 100.0 | 1×FPM; 1×SFR; 3×CD; 2×CL; | |||
| Structural and mechanistic insights into NDM-1 catalyzed hydrolysis of cephalosporins | monomer | 99.56 | 2×ZN; | |||
| Crystal structure of NDM-1 at pH7.5 (Bis-Tris) with 1 molecule per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 5×EDO; | |||
| native structure of NDM-1 crystallized at pH5.5 | monomer | 100 | 2×ZN; 1×OH; 5×EDO; 1×SIN; | |||
| Crystal structure of NDM-1 at pH7.5 (Succinate) with 1 molecule per asymmetric unit | monomer | 100 | 2×ZN; 6×EDO; 1×OH; | |||
| Crystal structure of NDM-1 at pH7.5 with 1 molecule per asymmetric unit (crystallized at succinate … | monomer | 100 | 2×ZN; 1×OH; 6×EDO; 1×GOL; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative CY22 | monomer | 100 | 1×9DU; 5×EDO; 2×ZN; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative CY32 | monomer | 100 | 2×ZN; 1×9DC; 5×EDO; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative CYT-14 | monomer | 100 | 2×ZN; 1×YT4; 5×EDO; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss0218 | monomer | 100 | 2×ZN; 1×EEL; | |||
| Structure of NDM-1 bound to QPX7728 at 1.05 A | monomer | 100 | 2×ZN; 1×QNA; | |||
| Crystal structure of NDM-1 in complex with D-captopril | monomer | 100 | 2×ZN; 1×MCO; | |||
| Crystal structure of NDM-1 complexed with compound 12 | monomer | 100 | 2×ZN; 1×T6Z; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 8 | monomer | 100 | 2×ZN; 1×P9T; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 9 | monomer | 100 | 2×ZN; 1×YKG; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 13 | monomer | 100 | 2×ZN; 1×7SX; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 7 | monomer | 100 | 2×ZN; 1×XJE; 2×ACT; | |||
| Crystal structure of NDM-1 with compound 7 | monomer | 100 | 2×ZN; 1×N1G; 1×GOL; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss02127 monomer | monomer | 100 | 2×ZN; 1×EEX; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss05010 | monomer | 100 | 1×EFR; 2×ZN; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss02122 | monomer | 100 | 1×EER; 2×ZN; | |||
| Crystal structure of NDM-1 Q123G mutant | monomer | 99.56 | 2×ZN; 1×OH; | |||
| Crystal structure of NDM-1 complexed with compound 14 | monomer | 100 | 2×ZN; 1×M3Q; 2×ACT; | |||
| Crystal Structure of Gold-bound NDM-1 | monomer | 100.0 | 3×AU; 2×SO4; | |||
| Crystal structure of NDM-1 complexed with compound 11 | monomer | 100 | 2×ZN; 1×KED; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 1 | monomer | 100 | 2×ZN; 1×TWB; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 3 | monomer | 100 | 2×ZN; 1×VKE; 2×ACT; | |||
| Crystal structure of NDM-1 complexed with compound 2 | monomer | 100 | 2×ZN; 1×FUJ; 2×ACT; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss04145 | monomer | 100 | 1×EDO; 1×EF0; 2×ZN; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss05008 | monomer | 100 | 1×EFF; 2×ZN; | |||
| X-ray structure of the NDM-4 beta-lactamase from Klebsiella pneumonia with L-Captopril bound | monomer | 99.56 | 2×ZN; 1×X8Z; | |||
| X-ray structure of the NDM-4 beta-lactamase from Klebsiella pneumonia in complex with 1-hydroxypyri… | monomer | 99.56 | 2×ZN; 1×WAF; 1×EDO; | |||
| Crystal Structure of NDM-1 D199N with Compound 7 | monomer | 99.56 | 2×ZN; 1×XJE; | |||
| X-ray structure of the NDM-4 beta-lactamase from Klebsiella pneumonia, apo form | monomer | 99.56 | 2×ZN; 2×EDO; | |||
| Crystal structure of NDM-1 in complex with heterodimer of D-captopril derivative wss02127 stereoiso… | monomer | 100 | 2×ZN; 1×OH; 1×EEX; 1×EKX; | |||
| Crystal structure of NDM-1 beta-lactamase in complex with boronic inhibitor cpd 6 | monomer | 100.0 | 2×ZN; 1×HB8; 2×CA; | |||
| Crystal Structure of NDM-1 D199N with Compound 16 | monomer | 99.56 | 2×ZN; 1×L8J; | |||
| Crystal structure of NDM-1 complexed with compound 6 | monomer | 100 | 2×ZN; 1×GTV; 2×ACT; | |||
| Structure of New Delhi Metallo-Beta-lactamase 4 (NDM-4) | monomer | 99.56 | 2×ZN; | |||
| NDM1-inhibitor co-structure | monomer | 100 | 1×ZN; 2×CD; 1×O0F; | |||
| Crystal structure of NDM-1 bound to ethylene glycol | monomer | 100 | 1×EDO; 2×ZN; | |||
| Crystal structure of NDM-1 beta-lactamase in complex with boronic inhibitor cpd 5 | monomer | 100 | 2×ZN; 2×CA; 1×HCH; | |||
| Crystal structure of NDM-1 with compound 9 | monomer | 100 | 2×ZN; 1×O5E; | |||
| Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EP complex | monomer | 100 | 2×ZN; 1×HIW; 1×SO4; | |||
| Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F | monomer | 100 | 3×ZN; | |||
| Crystal structure of NDM-1 bound to hydrolyzed meropenem | monomer | 100 | 1×0RV; 2×ZN; | |||
| Structure of New Delhi Metallo-Beta-lactamase 1 (NDM-1) | monomer | 100 | 1×ZN; 1×CO; 4×NI; 1×CD; | |||
| New Delhi metallo-beta-lactamase 1 (NDM1) mutant - H116Q | monomer | 99.56 | ||||
| Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1G | monomer | 100 | 3×ZN; | |||
| Crystal structure of NDM-1 bound to L-captopril | monomer | 100 | 1×X8Z; 2×ZN; | |||
| Crystal structure of NDM-1 at pH7.5 (Imidazole) with 1 molecule per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 2×EDO; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative CY41 | monomer | 100 | 2×ZN; 2×EDO; 1×9EX; | |||
| Crystal structure of NDM-1 at pH6.5 (Succinate) with 1 molecule per asymmetric unit | monomer | 100 | 2×ZN; 1×OH; 3×EDO; 1×SIN; | |||
| Crystal structure of NDM-1 in complex with L-captopril | monomer | 100 | 2×ZN; 1×X8Z; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss04146 | monomer | 100 | 2×ZN; 1×EF9; | |||
| NDM1-inhibitor co-structure | monomer | 100 | 3×CD; 1×ZN; 1×NZ0; | |||
| Crystal structure of Bismuth bound NDM-1 | monomer | 100 | 1×BS3; 1×GOL; | |||
| Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-3D | monomer | 100.0 | 1×ACT; 1×ZN; 3×CD; | |||
| Crystal structure of a chimeric NDM-1 metallo-beta-lactamase harboring the IMP-1 L3 loop | monomer | 100 | 2×ZN; | |||
| Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-1 | monomer | 94.3 | 2×ZN; 2×MES; 2×MG; | |||
| Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-3 | monomer | 94.3 | 2×ZN; 1×MES; 2×MG; 2×SV7; 1×NPO; | |||
| Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI2 complex | monomer | 100 | 2×ZN; 1×HIW; 1×SO4; | |||
| Crystal structure of NDM-1 bound to hydrolyzed meropenem representing an EI2 complex | monomer | 100 | 2×ZN; 1×LMP; 1×SO4; | |||
| Crystal structure of NDM-1 bound to hydrolyzed meropenem representing an EI1 complex | monomer | 100 | 2×ZN; 1×8YL; 1×SO4; | |||
| Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI1 complex | monomer | 100 | 2×ZN; 1×8YF; 1×SO4; | |||
| Haddock model of NDM-1/myricetin complex | monomer | 100 | 2×ZN; 1×MYC; | |||
| Crystal structure of NDM-1 in complex with D-captopril derivative wss02120 | monomer | 100 | 2×ZN; 1×EEO; | |||
| Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 from Klebsiella pneumoniae | monomer | 100 | 3×SO4; 4×GOL; | |||
| Haddock model of NDM-1/quercetin complex | monomer | 100 | 2×ZN; 1×QUE; | |||
| Haddock model of NDM-1/morin complex | monomer | 100 | 2×ZN; 1×MRI; | |||
| Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 from Klebsiella pnueumoniae | monomer | 100 | 2×SO4; 1×GOL; | |||
| Crystal structure of New Delhi Metallo-beta-lactamase (NDM-1) | monomer | 100.0 | 2×ZN; | |||
| The crystal structure of New Delhi Metallo-beta lactamase (NDM-1) | monomer | 100 | ||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 4ey2.1.A | monomer | 0.93 | 1×0RM; 2×ZN; | 100.00 | ||