Q38087 (DPOL_BPR69) Escherichia phage RB69 (Bacteriophage RB69)

DNA-directed DNA polymerase UniProtKBInterProInteractive Modelling

903 aa; Sequence (Fasta) ; 2 identical sequences: Escherichia phage F2: A0A6G6XH68; Escherichia phage PHB12: A0A482IFD9

Available Structures

121 Experimental Structures

DescriptionOligo-stateLigandsStructureRange
RB69 single-stranded DNA binding protein-DNA polymerase fusion Heteromer
Q7Y265;
GDP;ZN;1-903
Assess
SLIDING CLAMP, DNA POLYMERASE Heteromer
O80164;
893-903
Assess
Crystal structure of replisomal dimer of DNA polymerase from bacteriophage RB69 with DNA duplexeshomo-2-merDUP;CA;5GP;MG;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite dG at 1.8 angstrom resolutionmonomerDCP;CA;1-903
Assess
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi…monomerDUP;MG;1-903
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite dGmonomerTTP;CA;1-903
Assess
RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) ternary complex with dUpNpp and a dideoxy-term…monomerCA;DUP;1-903
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleosi…monomerDTP;CA;1-903
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddA/dT as the Penultimate…monomerDTP;CA;1-903
Assess
DNA Polymerase(L561A/S565G/Y567A) Ternary Complex with dUpNpp Opposite dA (Mn2+)monomerDUP;MN;1-903
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite dGmonomerDCP;CA;1-903
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dG in the presence of Mg…monomerDCP;MG;1-903
Assess
RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dCTP Opposite dGmonomerCA;DCP;1-903
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite GuanidinohydantoinmonomerDTP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-4 of primer/tempLate duplexmonomerATP;CA;1-903
Assess
RB69 DNA Polymerase Ternary Complex with dQTP Opposite dTmonomerQTP;CA;1-903
Assess
RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddA/dT as the Penultimate…monomerDGT;CA;1-903
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddA/dT as the Penultimate…monomerDCP;CA;1-903
Assess
RB69 DNA Polymerase (Y567A) ternary complex with dCTP Opposite 7,8-Dihydro-8-oxoguaninemonomerCTP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-1 of primer/template duplexmonomerATP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-3 of primer/template duplexmonomerATP;CA;1-903
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite dTmonomerTTP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-4 of primer/template duplexmonomerATP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-3 of primer/tempLate duplexmonomerATP;CA;1-903
Assess
Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohyd…monomer1-903
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite Difluorotoluene Nucleosi…monomerDCP;CA;1-903
Assess
RB69 DNA polymerase ternary complex with dcTP/dCmonomerDCP;CA;1-903
Assess
High-Resolution Structure of Apo RB69 DNA PolymerasemonomerK;GMP;1-903
Assess
RB69 DNA Polymerase (Y567A) ternary complex with dATP Opposite 7,8-dihydro-8-oxoguaninemonomerDTP;CA;1-903
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (GC rich sequence)monomerDCP;CA;1-903
Assess
RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termin…monomerDUP;CA;1-903
Assess
Crystal structure of the beta hairpin loop deletion variant of RB69 gp43 in complex with DNA contai…monomer1-903
Assess
DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+)monomerUPC;CA;1-903
Assess
RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dTTP Opposite dGmonomerTTP;CA;1-903
Assess
Triple Mutant APO structuremonomerSO4;GMP;1-903
Assess
Crystal structure of the D714A mutant of RB69 DNA polymerasemonomerGMP;SO4;CL;1-903
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-903
Assess
Closed binary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminate…monomerMG;1-903
Assess
Closed ternary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminat…monomerPPF;MG;1-903
Assess
Crystal structure of Enterobacteria phage RB69 gp43 DNA polymerase complexed with tetrahydrofuran c…monomer3DR;DOC;CA;1-903
Assess
CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTIONmonomerCA;GDP;1-903
Assess
5-hydroxycytosine paired with dAMP in RB69 gp43monomerSO4;1-903
Assess
Crystal structure of RB69 gp43 in complex with DNA with dATP opposite dTMPmonomerMG;DTP;1-903
Assess
Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21…monomer1-903
Assess
DNA POLYMERASE FROM BACTERIOPHAGE RB69monomer5GP;1-903
Assess
5-hydroxycytosine paired with dGMP in RB69 gp43monomerSO4;1-903
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-903
Assess
Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analogmonomerN5P;1-903
Assess
Crystal structure of RB69 gp43 in complex with DNA with 5-NITP opposite an abasic site analogmonomerMG;N5P;1-903
Assess
5-fluorocytosine paired with dAMP in RB69 gp43monomerSO4;1-903
Assess
5-fluorocytosine paired with ddGMP in RB69 gp43monomerSO4;1-903
Assess
Crystal structure of RB69 gp43 with DNA and dATP opposite 8-oxoGmonomerDTP;MN;SO4;1-903
Assess
DNA POLYMERASE FROM BACTERIOPHAGE RB69monomerGMP;1-903
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite Difluorotoluene Nucleosi…monomerDGT;CA;1-902
Assess
Ternary complex of rb69 mutant L415F with a ribonucleotide at -1 positionmonomerTTP;CA;NA;1-902
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (AT rich sequence)monomerTTP;CA;1-902
Assess
Ternary complex of RB69 mutant L415F with a ribonucleotide at 0 positionmonomerCA;TTP;NA;CL;1-902
Assess
Ternary complex of RB69 mutant L415F wit DUMPNPPmonomerCA;DUP;NA;1-902
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (GC rich sequence)monomerTTP;CA;1-902
Assess
Ternary complex of rb69 mutant L415F with ribonucleotide at -3 positionmonomerTTP;CA;NA;1-902
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite dT with 3-Deaza-adenine at the N-3 Position …monomerDTP;CA;1-902
Assess
Ternary complex of RB69 mutant L415F with ribonucleotide at -2 positionmonomerTTP;CA;NA;1-902
Assess
Ternary complex of the L415F mutant RB69 exo(-)polymerasemonomerCA;NA;TTP;GOL;1-902
Assess
Ternary complex of rb69 mutant l415f with ribonucleotides at -1 and -2 positionmonomerTTP;CA;NA;PO4;1-902
Assess
Crystal structure of RB69 GP43 in complex with DNA containing Thymine Glycolmonomer1-902
Assess
Crystal structure of RB69 GP43 in complex with DNA containing an abasic site analogmonomer1-902
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-902
Assess
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycolmonomer1-902
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite dTmonomerDGT;CA;1-901
Assess
RB69 DNA Polymerase L415K Ternary ComplexmonomerTTP;CA;1-901
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dCTP Opposite dTmonomerDCP;CA;1-901
Assess
RB69 DNA Polymerase L415A Ternary ComplexmonomerTTP;CA;1-901
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite Difluorotoluene Nucleosi…monomerTTP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dUpCpp Opposite dAmonomerDUP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-2 of primer/tempLate duplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dDTP Opposite dTmonomerDTP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomerTTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-1 of primer/template duplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomerDGT;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dGTP/dAmonomerDGT;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex containing dUpNppmonomerDUP;CA;1-901
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tComonomerATP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dG/dT at position n-5 of primer/template duplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dTTP Opposite an Abasic Site and ddT/dA as the Penultimate…monomerTTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-2 of primer/template duplexmonomerATP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dGTP/dGmonomerDGT;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dGTP/dTmonomerDGT;CA;1-901
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dGT Opposite 3tComonomerDGT;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddG/dC as the Penultimate…monomerDCP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dCTP Opposite an Abasic Site and ddC/dG as the Penultimate…monomerDCP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dTTP/dTmonomerTTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dTTP/dGmonomerTTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dTTP/dCmonomerTTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dATP/dAmonomerDTP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dDTP Opposite dT with 3-Deaza-adenine at the N-1 Position …monomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dATP/dCmonomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dCTP/dAmonomerDCP;CA;1-901
Assess
RB69 DNA Polymerase L415M Ternary ComplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase L415G Ternary ComplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite an Abasic Site and ddC/dG as the Penultimate…monomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dATP/dTmonomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dATP/dGmonomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dGTP/dCmonomerDGT;CA;1-901
Assess
RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dAmonomerUPC;MG;1-901
Assess
RB69 DNA Polymerase Ternary Complex with dATP Opposite dTmonomerDTP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dCTP/dTmonomerDCP;CA;1-901
Assess
RB69 DNA polymerase ternary complex with dT/dG at position n-5 of primer/template duplexmonomerATP;CA;1-901
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Difluorotoluene NucleosidemonomerATP;CA;1-901
Assess
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-termi…monomerDUP;MN;1-901
Assess
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2monomerCA;CL;TTP;1-901
Assess
Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 positionmonomerTTP;CA;NA;GOL;1-901
Assess
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 1monomerCA;CL;TTP;1-901
Assess
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerasemonomerXG4;CA;SO4;GOL;NA;1-901
Assess
Structure of the Replicating Complex of a Pol Alpha Family DNA PolymerasemonomerCA;TTP;1-901
Assess
RB69 DNA polymerase ternary complex with dTTP/dAmonomerTTP;CA;1-900
Assess
RB69 DNA polymerase ternary complex with dCTP/dGmonomerDCP;CA;1-900
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (GC rich sequence)monomerTTP;CA;1-900
Assess
CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CO…monomerDCP;CA;1-899
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)monomerDCP;CA;1-897
Assess
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerasemonomerXG4;CA;NA;1-895
Assess
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (AT rich sequence)monomerTTP;CA;1-895
Assess

1 Homology model

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomerCA;0.883uiq.1.A1-901
100.00
Assess

Alignments