Q96QU1 (PCD15_HUMAN) Homo sapiens (Human)

Protocadherin-15 UniProtKBInterProSTRINGInteractive Modelling

1955 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 6; )

Sequence Features

 19S -> A (in dbSNP:rs11004439) VAR_028289 dbSNP
 134R -> G (in DFNB23; dbSNP:rs137853003) VAR_024035 dbSNP
 134R -> Q (in USH1F; dbSNP:rs767966376) VAR_071696 dbSNP
 174N -> S (in dbSNP:rs145037203) VAR_071697 dbSNP
 178D -> G (in USH1DF) VAR_069297
 262G -> D (in DFNB23; dbSNP:rs137853002) VAR_024036 dbSNP
 380G -> S (in dbSNP:rs10825269) VAR_028290 dbSNP
 435D -> A (in dbSNP:rs4935502) VAR_028291 dbSNP
 929R -> Q (in dbSNP:rs2135720) VAR_028292 dbSNP
 1273R -> S (in dbSNP:rs111033363) VAR_071698 dbSNP
 1342Q -> K (in USH1F; dbSNP:rs61731387) VAR_024037 dbSNP
 1867Missing (in USH1F) VAR_024038
 1377-1397Helical
 32-120
 1576-1955Missing (in DFNB23) VAR_079507
 31-140Extracellular cadherin domain
IPR041149PF18432
 152-256Cadherin-like
IPR002126PF00028
 521-605Cadherin-like
IPR002126PF00028
 621-708Cadherin-like
IPR002126PF00028
 726-810Cadherin-like
IPR002126PF00028
 824-916Cadherin-like
IPR002126PF00028
 938-1027Cadherin-like
IPR002126PF00028
 1046-1135Cadherin-like
IPR002126PF00028
 1153-1242Cadherin-like
IPR002126PF00028

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370N and Mouse Cadherin-23 EC1-2 T15E Heteromer
Q99PF4;
18×CA;6n2e31-390
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370Nhomo-2-mer 10×CA;6mfo32-385
Crystal Structure of Human Protocadherin-15 EC2-3homo-2-mer CA;5uly146-387
Crystal Structure of Human Protocadherin-15 EC3-5monomer CA;5t4m263-608
Crystal Structure of Human Protocadherin-15 EC3-5 D414A Variantmonomer CA;5t4n263-608
Crystal Structure of Human Protocadherin-15 EC3-5 CD2-1monomer CA;NA;6e8f263-608
Crystal Structure of Human Protocadherin-15 EC8-10monomer CA;CL;4xhz816-1144
Crystal Structure of Human Protocadherin-15 EC2-3 V250Nmonomer CA;6eb5145-389

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer CA;-1.855w1d.1.A398-812
93.54
monomer MAN;CA;0.446eet.1.A920-1362
96.27
monomer CA;-1.825t4m.2.A247-617
94.35
homo-2-mer NAG;-1.536c13.1.A816-1357
95.01
homo-2-mer 10×CA;MAN;0.796cv7.1.B26-387
96.16
monomer -1.596c14.1.A1140-1405
94.38
homo-4-mer CA;-3.275v5x.1.A614-1025
29.47
homo-4-mer 12×CA;-4.035v5x.1.A505-916
33.08

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
3monomerCA;-1.935w1d.1.A398-812
93.54
4monomerCA;-1.765w1d.1.A398-819
93.54
2homo-2-merCA;-0.056bxz.1.A8-245
98.39
3monomerCA;0.335t4m.1.A263-608
100.00
6monomerCA;-1.865w1d.1.A398-812
93.54
6monomerMAN;CA;0.436eet.1.A920-1362
96.27
3monomerCA;-1.346e8f.2.A263-603
100.00
4monomerMAN;CA;0.456eet.1.A927-1369
96.27
6monomerCA;0.384xhz.1.A816-1144
100.00
4monomerCA;0.394xhz.1.A823-1151
100.00
6monomerCA;-1.865t4m.2.A247-617
94.35
4monomerCA;-1.595t4n.2.A247-624
94.07
2monomer-1.656c14.1.A22-287
94.97
6homo-2-merNAG;-1.536c13.1.A816-1357
94.57
4homo-2-merNAG;-1.536c13.1.A823-1364
94.57
6monomer-1.706c14.1.A1140-1405
94.10
3monomerCA;-0.396n2e.1.B31-390
99.45
6homo-2-mer10×CA;0.476cv7.1.B28-387
97.53
4monomer-1.696c14.1.A1147-1412
94.10
4monomerCA;-2.436e8f.2.A248-610
96.02
4homo-2-mer10×CA;-1.106mfo.1.B32-385
99.45
4monomerCA;-0.486n2e.1.B28-390
98.35
3monomerCA;-4.135erp.1.B388-820
25.61
3monomerCA;-4.135dzy.2.A399-813
25.06
6monomerCA;-3.915szq.1.A815-1244
27.70
4monomerCA;-3.415szq.1.A822-1251
27.76
6homo-4-merCA;-3.375v5x.1.A614-1025
29.47
4homo-4-merCA;-3.495v5x.1.A621-1032
29.47
4homo-4-mer12×CA;-4.275v5x.1.A512-923
33.08
6homo-4-mer12×CA;-4.135v5x.1.A505-916
33.08
3monomerCA;-4.195v5x.1.C507-916
33.08
3monomerCA;-4.533q2w.1.A449-817
31.78
2monomer-4.523q2w.1.A2-164
24.83