Q96QU1 (PCD15_HUMAN) Homo sapiens (Human)

Protocadherin-15 UniProtKBInterProSTRINGInteractive Modelling

1955 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 6; )

Sequence Features

 19S -> A (in dbSNP:rs11004439). VAR_028289 dbSNP
 134R -> G (in DFNB23; dbSNP:rs137853003). VAR_024035 dbSNP
 134R -> Q (in USH1F; dbSNP:rs767966376). VAR_071696 dbSNP
 174N -> S (in dbSNP:rs145037203). VAR_071697 dbSNP
 178D -> G (in USH1DF). VAR_069297
 262G -> D (in DFNB23; dbSNP:rs137853002). VAR_024036 dbSNP
 380G -> S (in dbSNP:rs10825269). VAR_028290 dbSNP
 435D -> A (in dbSNP:rs4935502). VAR_028291 dbSNP
 929R -> Q (in dbSNP:rs2135720). VAR_028292 dbSNP
 1273R -> S (in dbSNP:rs111033363). VAR_071698 dbSNP
 1342Q -> K (in USH1F; dbSNP:rs61731387). VAR_024037 dbSNP
 1867Missing (in USH1F). VAR_024038
 1377-1397Helical.
 32-120
 1576-1955Missing (in DFNB23). VAR_079507
 31-140Extracellular cadherin domain
IPR041149PF18432
 152-256Cadherin-like
IPR002126PF00028
 521-605Cadherin-like
IPR002126PF00028
 621-708Cadherin-like
IPR002126PF00028
 726-810Cadherin-like
IPR002126PF00028
 824-916Cadherin-like
IPR002126PF00028
 938-1027Cadherin-like
IPR002126PF00028
 1046-1135Cadherin-like
IPR002126PF00028
 1153-1242Cadherin-like
IPR002126PF00028

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal Structure of Human Protocadherin-15 EC2-3homo-2-mer CA;5uly146-387
Crystal Structure of Human Protocadherin-15 EC3-5monomer CA;5t4m263-608
Crystal Structure of Human Protocadherin-15 EC3-5 D414A Variantmonomer CA;5t4n263-608
Crystal Structure of Human Protocadherin-15 EC3-5 CD2-1monomer NA;CA;6e8f263-608
Crystal Structure of Human Protocadherin-15 EC8-10monomer CA;CL;4xhz816-1144

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
homo-2-mer NAG;-1.536c13.1.A816-1357
95.01
homo-4-mer CA;-3.295v5x.1.A614-1025
29.47
monomer CA;-1.945w1d.1.A398-812
93.54
homo-2-mer 10×CA;0.536cv7.1.A28-387
97.53
homo-4-mer 12×CA;-3.905v5x.1.D505-916
33.08
monomer -1.596c14.1.A1140-1405
94.97

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
2monomer-4.523q2w.1.A2-164
24.83
2 Heteromer
CA;-0.056bxz.1.A8-245
98.39
3monomerCA;-4.653ubh.1.A486-807
29.21
3monomerCA;-4.385dzy.2.A399-813
25.06
3monomerCA;-2.025w1d.1.A398-812
93.54
4homo-2-merNAG;-1.536c13.1.A823-1364
94.57
4monomerCA;-3.415szq.1.A822-1251
27.76
4homo-4-mer12×CA;-3.825v5x.1.D512-923
33.08
4monomerCA;-1.845w1d.1.A398-819
93.54
4homo-2-mer10×CA;0.526cv7.1.A28-387
97.53
4homo-4-merCA;-3.285v5x.1.D621-1032
29.47
6monomerCA;-3.885szq.1.A815-1244
27.70
6homo-4-mer12×CA;-3.905v5x.1.D505-916
33.08
6homo-2-merNAG;-1.536c13.1.A816-1357
94.57
6homo-4-merCA;-3.305v5x.1.A614-1025
29.47
6monomerCA;-1.965w1d.1.A398-812
93.54
6homo-2-mer10×CA;0.476cv7.1.A28-387
97.53
2monomer-1.656c14.1.A22-287
94.97
3monomerCA;-1.726e8f.2.A263-603
100.00
3monomerCA;0.335t4m.1.A263-608
100.00
3monomerCA;-4.775v5x.1.A614-954
30.51
4monomerCA;-1.766e8f.2.A263-610
100.00
4monomerCA;0.394xhz.1.A823-1151
100.00
4monomer-1.696c14.1.A1147-1412
94.10
6monomerCA;0.325t4m.1.A263-608
100.00
6monomerCA;-1.736e8f.2.A263-603
100.00
6monomer-1.706c14.1.A1140-1405
94.10
6monomerCA;0.384xhz.1.A816-1144
100.00
3monomerCA;MAN;0.296cv7.1.A28-387
97.53
3monomerCA;-4.683q2w.1.A449-817
31.78
4monomerCA;0.035t4n.2.A263-623
99.72
6monomerCA;-4.573q2w.1.A449-817
31.78