SMTL ID : 1kc8.1

Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.01 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x BLS: BLASTICIDIN S(Non-functional Binders)
117 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
3 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
86 x NA: SODIUM ION(Non-functional Binders)
22 x CL: CHLORIDE ION(Non-functional Binders)
5 x CD: CADMIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hansen, J. et al., Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit. J.Mol.Biol. (2003)
Release Date
2003-07-22
Peptides
RIBOSOMAL PROTEIN L2: C
RIBOSOMAL PROTEIN L3: D
RIBOSOMAL PROTEIN L4: E
RIBOSOMAL PROTEIN L5: F
RIBOSOMAL PROTEIN L6: G
RIBOSOMAL PROTEIN L7AE: H
RIBOSOMAL PROTEIN L10: I
RIBOSOMAL PROTEIN L10E: J
RIBOSOMAL PROTEIN L13: K
RIBOSOMAL PROTEIN L14: L
RIBOSOMAL PROTEIN L15: M
RIBOSOMAL PROTEIN L15E: N
RIBOSOMAL PROTEIN L18: O
RIBOSOMAL PROTEIN L18E: P
RIBOSOMAL PROTEIN L19E: Q
RIBOSOMAL PROTEIN L21E: R
RIBOSOMAL PROTEIN L22: S
RIBOSOMAL PROTEIN L23: T
RIBOSOMAL PROTEIN L24: U
RIBOSOMAL PROTEIN L24E: V
RIBOSOMAL PROTEIN L29: W
RIBOSOMAL PROTEIN L30: X
RIBOSOMAL PROTEIN L31E: Y
RIBOSOMAL PROTEIN L32E: Z
RIBOSOMAL PROTEIN L37Ae: 0
RIBOSOMAL PROTEIN L37E: 1
RIBOSOMAL PROTEIN L39E: 2
RIBOSOMAL PROTEIN L44E: 3
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
X
X
Y
Y
Z
Z
0
1
1
2
2
3
3
4

RIBOSOMAL PROTEIN L2

RIBOSOMAL PROTEIN L3

RIBOSOMAL PROTEIN L4

RIBOSOMAL PROTEIN L5

RIBOSOMAL PROTEIN L6

RIBOSOMAL PROTEIN L7AE

RIBOSOMAL PROTEIN L10

RIBOSOMAL PROTEIN L10E

RIBOSOMAL PROTEIN L13

RIBOSOMAL PROTEIN L14

RIBOSOMAL PROTEIN L15

RIBOSOMAL PROTEIN L15E

RIBOSOMAL PROTEIN L18

RIBOSOMAL PROTEIN L18E

RIBOSOMAL PROTEIN L19E

RIBOSOMAL PROTEIN L21E

RIBOSOMAL PROTEIN L22

RIBOSOMAL PROTEIN L23

RIBOSOMAL PROTEIN L24

RIBOSOMAL PROTEIN L24E

RIBOSOMAL PROTEIN L29

RIBOSOMAL PROTEIN L30

RIBOSOMAL PROTEIN L31E

RIBOSOMAL PROTEIN L32E

RIBOSOMAL PROTEIN L37Ae

RIBOSOMAL PROTEIN L37E

RIBOSOMAL PROTEIN L39E

RIBOSOMAL PROTEIN L44E

Related Entries With Identical Sequence

1jj2.1 | 1k73.1 | 1k8a.1 | 1k9m.1 | 1kd1.1 | 1kqs.1 | 1m1k.1 | 1m90.1 | 1n8r.1 | 1nji.1 | 1q7y.1 | 1q81.1 | 1q82.1 | 1q86.1 | 1qvf.1 | 1qvg.1 | 1s72.1 | 1vq4.1 | 1vq5.1 | 1vq6.1 | 1vq7.1 | 1vq8.1 | 1vq9.1 | 1vqk.1 | 1vql.1 | 1vqm.1 | 1vqn.1 | 1vqo.1 | 1vqp.1 | 1w2b.1  more...