SMTL ID : 1ljt.1

Crystal Structure of Macrophage Migration Inhibitory Factor complexed with (S,R)-3-(4-hydroxyphenyl)-4,5-dihydro-5-isoxazole-acetic acid methyl ester (ISO-1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

3 x HDI: 3-(4-HYDROXYPHENYL)-4,5-DIHYDRO-5-ISOXAZOLE-ACETIC ACID METHYL ESTER(Non-covalent)

HDI.1: 11 residues within 4Å: Chain A: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, V.106, F.113 Chain B: Y.95, N.97 12 PLIP interactions: 10 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:M.2, A:Y.36, A:Y.36, A:H.62, A:I.64, A:V.106, A:V.106, A:F.113 Hydrogen bonds: A:I.64, B:N.97 Salt bridges: A:K.32 pi-Stacking: B:Y.95 HDI.2: 12 residues within 4Å: Chain B: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, M.101, V.106, F.113 Chain C: Y.95, N.97 12 PLIP interactions: 10 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:M.2, B:H.62, B:I.64, B:V.106, B:V.106, B:F.113, B:F.113 Hydrogen bonds: B:P.1, B:I.64, C:N.97 Salt bridges: B:K.32 pi-Stacking: C:Y.95 HDI.3: 10 residues within 4Å: Chain A: Y.95, N.97 Chain C: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, V.106 9 PLIP interactions: 7 interactions with chain C, 2 interactions with chain A Hydrophobic interactions: C:M.2, C:H.62, C:I.64, C:V.106 Hydrogen bonds: C:P.1, C:I.64, A:N.97 Salt bridges: C:K.32 pi-Stacking: A:Y.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lubetsky, J.B. et al., The Tautomerase Active Site of Macrophage Migration Inhibitory factor is a Potential Target for Discovery of Novel Anti-inflammatory Agents. J.Biol.Chem. (2002)

Release Date

2002-11-27

Peptides

Macrophage migration inhibitory factor: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Macrophage migration inhibitory factor

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