SMTL ID : 1mbd.1

X-ray structure of sperm whale deoxymoglobin refined at 1.4A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: A.57, S.58, E.59, D.60 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.59, A:D.60

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 16 residues within 4Å: Chain A: T.39, K.42, F.43, R.45, H.64, T.67, V.68, A.71, S.92, H.93, H.97, I.99, Y.103, L.104, I.107, F.138 20 PLIP interactions: 20 interactions with chain A, Hydrophobic interactions: A:T.39, A:F.43, A:F.43, A:T.67, A:V.68, A:A.71, A:I.99, A:Y.103, A:I.107, A:I.107, A:F.138 Hydrogen bonds: A:S.92 Water bridges: A:R.45, A:R.45, A:P.88, A:S.92 Salt bridges: A:R.45, A:H.93, A:H.97 Metal complexes: A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Phillips, S.E., X-ray structure of sperm whale deoxymoglobin refined at 1.4A resolution. to be published

Release Date

1982-02-03

Peptides

MYOGLOBIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MYOGLOBIN

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