SMTL ID : 1p0q.1

Crystal structure of soman-aged human butyryl cholinesterase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

monomer

Ligands

2 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.1: 6 residues within 4Å: Chain A: N.241, N.245, L.249, F.278, P.281, Y.282 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.245, A:L.249 Hydrogen bonds: A:F.278, A:Y.282 NAG-NAG-FUC.2: 4 residues within 4Å: Chain A: P.335, G.336, S.338, N.341 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.336

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 4 residues within 4Å: Chain A: K.105, N.106, N.188, K.190 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.106 Hydrogen bonds: A:N.106 Water bridges: A:K.190 NAG.4: 1 residues within 4Å: Chain A: N.57 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.14

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: Q.316, G.413, N.414, N.415 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.316, A:N.414, A:N.415, A:N.415 Water bridges: A:N.415, A:N.415, A:N.415

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 2 residues within 4Å: Chain A: T.488, T.508 Ligand excluded by PLIP

1 x VXA: METHYLPHOSPHONIC ACID ESTER GROUP(Covalent)

VXA.7: 7 residues within 4Å: Chain A: G.115, G.116, G.117, S.198, A.199, H.438 Ligands: GOL.9 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.116, A:G.117, A:A.199

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 5 residues within 4Å: Chain A: L.18, Y.61, W.98, D.129, K.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.98, A:D.129, A:K.131 GOL.9: 7 residues within 4Å: Chain A: W.82, G.115, G.116, E.197, S.198, H.438 Ligands: VXA.7 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.115, A:G.115, A:H.438 Water bridges: A:G.116, A:T.120, A:T.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nicolet, Y. et al., Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products. J.Biol.Chem. (2003)

Release Date

2003-08-05

Peptides

Cholinesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cholinesterase

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